RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
CCDC43-202ENST00000457422 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
CCDC43-202ENST00000457422 FCGBPQ9Y6R7 5405 aaPredicted RBP5.74□□□□□ -1.49
CCDC43-202ENST00000457422 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.64□□□□□ -1.51
CCDC43-202ENST00000457422 INE1O15225 51 aa5.6□□□□□ -1.51
CCDC43-202ENST00000457422 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
CCDC43-202ENST00000457422 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
CCDC43-202ENST00000457422 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
CCDC43-202ENST00000457422 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
CCDC43-202ENST00000457422 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
CCDC43-202ENST00000457422 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
CCDC43-202ENST00000457422 MT1GP13640 62 aa5.54□□□□□ -1.52
CCDC43-202ENST00000457422 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
CCDC43-202ENST00000457422 MT1MQ8N339 61 aa5.52□□□□□ -1.53
CCDC43-202ENST00000457422 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.53
CCDC43-202ENST00000457422 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
CCDC43-202ENST00000457422 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
CCDC43-202ENST00000457422 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
CCDC43-202ENST00000457422 KRTAP5-3Q6L8H2 238 aa5.29□□□□□ -1.56
CCDC43-202ENST00000457422 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
CCDC43-202ENST00000457422 KRTAP5-9P26371 169 aa5.23□□□□□ -1.57
CCDC43-202ENST00000457422 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
CCDC43-202ENST00000457422 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
CCDC43-202ENST00000457422 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
CCDC43-202ENST00000457422 SPRR2EP22531 72 aa5.05□□□□□ -1.6
CCDC43-202ENST00000457422 SPRR2BP35325 72 aa5.05□□□□□ -1.6
CCDC43-202ENST00000457422 SPRR2AP35326 72 aa5.05□□□□□ -1.6
CCDC43-202ENST00000457422 NEBP20929 6669 aa4.97□□□□□ -1.61
CCDC43-202ENST00000457422 MT1AP04731 61 aa4.95□□□□□ -1.62
CCDC43-202ENST00000457422 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
CCDC43-202ENST00000457422 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
CCDC43-202ENST00000457422 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
CCDC43-202ENST00000457422 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
CCDC43-202ENST00000457422 SPRR2DP22532 72 aa4.85□□□□□ -1.63
CCDC43-202ENST00000457422 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
CCDC43-202ENST00000457422 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
CCDC43-202ENST00000457422 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
CCDC43-202ENST00000457422 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
CCDC43-202ENST00000457422 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
CCDC43-202ENST00000457422 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
CCDC43-202ENST00000457422 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
CCDC43-202ENST00000457422 LCE3EQ5T5B0 92 aa4.55□□□□□ -1.68
CCDC43-202ENST00000457422 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
CCDC43-202ENST00000457422 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
CCDC43-202ENST00000457422 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
CCDC43-202ENST00000457422 MT3P25713 68 aa4.45□□□□□ -1.7
CCDC43-202ENST00000457422 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
CCDC43-202ENST00000457422 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
CCDC43-202ENST00000457422 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
CCDC43-202ENST00000457422 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
CCDC43-202ENST00000457422 MT4P47944 62 aa4.25□□□□□ -1.73
CCDC43-202ENST00000457422 PRM1P04553 51 aa4.21□□□□□ -1.74
CCDC43-202ENST00000457422 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
CCDC43-202ENST00000457422 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.74
CCDC43-202ENST00000457422 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
CCDC43-202ENST00000457422 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
CCDC43-202ENST00000457422 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
CCDC43-202ENST00000457422 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
CCDC43-202ENST00000457422 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
CCDC43-202ENST00000457422 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CCDC43-202ENST00000457422 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
CCDC43-202ENST00000457422 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
CCDC43-202ENST00000457422 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
CCDC43-202ENST00000457422 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
CCDC43-202ENST00000457422 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
CCDC43-202ENST00000457422 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
CCDC43-202ENST00000457422 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
CCDC43-202ENST00000457422 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
CCDC43-202ENST00000457422 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
CCDC43-202ENST00000457422 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
CCDC43-202ENST00000457422 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
CCDC43-202ENST00000457422 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
CCDC43-202ENST00000457422 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
CCDC43-202ENST00000457422 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
CCDC43-202ENST00000457422 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
CCDC43-202ENST00000457422 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
CCDC43-202ENST00000457422 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 55.1 ms