RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 KRTAP4-2Q9BYR5 136 aa1.67□□□□□ -2.14
DEPDC1-202ENST00000456315 KRTAP9-7A8MTY7 169 aa1.66□□□□□ -2.14
DEPDC1-202ENST00000456315 KRTAP9-9Q9BYP9 154 aa1.66□□□□□ -2.14
DEPDC1-202ENST00000456315 KRTAP9-4Q9BYQ2 154 aa1.66□□□□□ -2.14
DEPDC1-202ENST00000456315 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
DEPDC1-202ENST00000456315 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
DEPDC1-202ENST00000456315 SYNE2Q8WXH0 6885 aaKnown RBP1.63□□□□□ -2.15
DEPDC1-202ENST00000456315 MT1HP80294 61 aa1.63□□□□□ -2.15
DEPDC1-202ENST00000456315 KRTAP2-3P0C7H8 128 aa1.63□□□□□ -2.15
DEPDC1-202ENST00000456315 KRTAP19-8Q3LI54 63 aa1.63□□□□□ -2.15
DEPDC1-202ENST00000456315 KRTAP2-4Q9BYR9 128 aa1.63□□□□□ -2.15
DEPDC1-202ENST00000456315 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
DEPDC1-202ENST00000456315 INE1O15225 51 aa1.62□□□□□ -2.15
DEPDC1-202ENST00000456315 KRTAP19-5Q3LI72 72 aa1.62□□□□□ -2.15
DEPDC1-202ENST00000456315 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
DEPDC1-202ENST00000456315 KRTAP9-3Q9BYQ3 159 aa1.62□□□□□ -2.15
DEPDC1-202ENST00000456315 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
DEPDC1-202ENST00000456315 KRTAP4-3Q9BYR4 195 aa1.6□□□□□ -2.15
DEPDC1-202ENST00000456315 KRTAP6-3Q3LI67 103 aa1.59□□□□□ -2.15
DEPDC1-202ENST00000456315 KRTAP5-3Q6L8H2 238 aa1.59□□□□□ -2.16
DEPDC1-202ENST00000456315 LCE3CQ5T5A8 94 aa1.58□□□□□ -2.16
DEPDC1-202ENST00000456315 KRTAP5-9P26371 169 aa1.58□□□□□ -2.16
DEPDC1-202ENST00000456315 NEBP20929 6669 aa1.57□□□□□ -2.16
DEPDC1-202ENST00000456315 KRTAP4-9Q9BYQ8 210 aa1.56□□□□□ -2.16
DEPDC1-202ENST00000456315 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
DEPDC1-202ENST00000456315 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
DEPDC1-202ENST00000456315 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
DEPDC1-202ENST00000456315 M0R2T5 61 aa1.48□□□□□ -2.17
DEPDC1-202ENST00000456315 MT1LQ93083 61 aa1.48□□□□□ -2.17
DEPDC1-202ENST00000456315 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
DEPDC1-202ENST00000456315 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
DEPDC1-202ENST00000456315 MT1EP04732 61 aa1.45□□□□□ -2.18
DEPDC1-202ENST00000456315 MT1GP13640 62 aa1.44□□□□□ -2.18
DEPDC1-202ENST00000456315 KRTAP5-5Q701N2 237 aaPredicted RBP1.44□□□□□ -2.18
DEPDC1-202ENST00000456315 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
DEPDC1-202ENST00000456315 KRTAP19-4Q3LI73 84 aa1.4□□□□□ -2.19
DEPDC1-202ENST00000456315 LCE1AQ5T7P2 110 aa1.39□□□□□ -2.19
DEPDC1-202ENST00000456315 KRTAP4-11Q9BYQ6 195 aa1.38□□□□□ -2.19
DEPDC1-202ENST00000456315 LCE1EQ5T753 118 aa1.38□□□□□ -2.19
DEPDC1-202ENST00000456315 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
DEPDC1-202ENST00000456315 KRTAP20-1Q3LI63 56 aa1.37□□□□□ -2.19
DEPDC1-202ENST00000456315 LCE3BQ5TA77 95 aa1.36□□□□□ -2.19
DEPDC1-202ENST00000456315 LCE1DQ5T752 114 aa1.34□□□□□ -2.2
DEPDC1-202ENST00000456315 KRTAP2-2Q9BYT5 123 aa1.33□□□□□ -2.2
DEPDC1-202ENST00000456315 KRTAP6-1Q3LI64 71 aa1.33□□□□□ -2.2
DEPDC1-202ENST00000456315 MT1MQ8N339 61 aa1.33□□□□□ -2.2
DEPDC1-202ENST00000456315 GPR98Q8WXG9 6306 aa1.33□□□□□ -2.2
DEPDC1-202ENST00000456315 PRM1P04553 51 aa1.33□□□□□ -2.2
DEPDC1-202ENST00000456315 KRTAP5-4Q6L8H1 288 aa1.29□□□□□ -2.2
DEPDC1-202ENST00000456315 LCE5AQ5TCM9 118 aa1.26□□□□□ -2.21
DEPDC1-202ENST00000456315 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
DEPDC1-202ENST00000456315 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
DEPDC1-202ENST00000456315 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
DEPDC1-202ENST00000456315 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
DEPDC1-202ENST00000456315 LCE3DQ9BYE3 92 aa1.23□□□□□ -2.21
DEPDC1-202ENST00000456315 LCE3EQ5T5B0 92 aa1.21□□□□□ -2.22
DEPDC1-202ENST00000456315 MT1AP04731 61 aa1.17□□□□□ -2.22
DEPDC1-202ENST00000456315 LCE4AQ5TA78 99 aa1.15□□□□□ -2.23
DEPDC1-202ENST00000456315 SPRR2FQ96RM1 72 aa1.14□□□□□ -2.23
DEPDC1-202ENST00000456315 KRTAP5-8O75690 187 aa1.08□□□□□ -2.24
DEPDC1-202ENST00000456315 KRTAP5-11Q6L8G4 156 aa1.06□□□□□ -2.24
DEPDC1-202ENST00000456315 KRTAP5-1Q6L8H4 278 aa1.05□□□□□ -2.24
DEPDC1-202ENST00000456315 MT3P25713 68 aa1.05□□□□□ -2.24
DEPDC1-202ENST00000456315 LCE1FQ5T754 118 aa1.03□□□□□ -2.24
DEPDC1-202ENST00000456315 KRTAP4-4Q9BYR3 166 aa1.03□□□□□ -2.24
DEPDC1-202ENST00000456315 SPRR2EP22531 72 aa0.98□□□□□ -2.25
DEPDC1-202ENST00000456315 KRTAP20-2Q3LI61 65 aa0.93□□□□□ -2.26
DEPDC1-202ENST00000456315 SPRR2DP22532 72 aa0.91□□□□□ -2.26
DEPDC1-202ENST00000456315 SPRR2AP35326 72 aa0.89□□□□□ -2.27
DEPDC1-202ENST00000456315 SPRR2BP35325 72 aa0.88□□□□□ -2.27
DEPDC1-202ENST00000456315 LCE1CQ5T751 118 aa0.88□□□□□ -2.27
DEPDC1-202ENST00000456315 LCE1BQ5T7P3 118 aa0.88□□□□□ -2.27
DEPDC1-202ENST00000456315 KRTAP21-2Q3LI59 83 aa0.87□□□□□ -2.27
DEPDC1-202ENST00000456315 MT4P47944 62 aa0.86□□□□□ -2.27
DEPDC1-202ENST00000456315 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
DEPDC1-202ENST00000456315 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
DEPDC1-202ENST00000456315 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 68.6 ms