RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 TNP1P09430 55 aa5.41□□□□□ -1.54
UBE2D4-209ENST00000454428 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
UBE2D4-209ENST00000454428 A0A1B0GU33 70 aa5.34□□□□□ -1.55
UBE2D4-209ENST00000454428 SPANXA2-OT1Q8N9U9 137 aa5.33□□□□□ -1.56
UBE2D4-209ENST00000454428 SNURFQ9Y675 71 aa5.33□□□□□ -1.56
UBE2D4-209ENST00000454428 SERP1Q9Y6X1 66 aa5.31□□□□□ -1.56
UBE2D4-209ENST00000454428 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
UBE2D4-209ENST00000454428 PCP4L1A6NKN8 68 aa5.29□□□□□ -1.56
UBE2D4-209ENST00000454428 SEC61GP60059 68 aa5.29□□□□□ -1.56
UBE2D4-209ENST00000454428 A8MU10 97 aa5.23□□□□□ -1.57
UBE2D4-209ENST00000454428 COA5Q86WW8 74 aa5.23□□□□□ -1.57
UBE2D4-209ENST00000454428 SMIM20Q8N5G0 67 aa5.23□□□□□ -1.57
UBE2D4-209ENST00000454428 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
UBE2D4-209ENST00000454428 SMIM26A0A096LP01 95 aa5.16□□□□□ -1.58
UBE2D4-209ENST00000454428 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
UBE2D4-209ENST00000454428 MT1AP04731 61 aa5.12□□□□□ -1.59
UBE2D4-209ENST00000454428 J3QR89 54 aa5.07□□□□□ -1.6
UBE2D4-209ENST00000454428 KRTAP6-2Q3LI66 62 aa5.05□□□□□ -1.6
UBE2D4-209ENST00000454428 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
UBE2D4-209ENST00000454428 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
UBE2D4-209ENST00000454428 A0A1B0GV90 55 aa4.99□□□□□ -1.61
UBE2D4-209ENST00000454428 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.62
UBE2D4-209ENST00000454428 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
UBE2D4-209ENST00000454428 A0A1B0GU69 56 aa4.93□□□□□ -1.62
UBE2D4-209ENST00000454428 SERP2Q8N6R1 65 aa4.92□□□□□ -1.62
UBE2D4-209ENST00000454428 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
UBE2D4-209ENST00000454428 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
UBE2D4-209ENST00000454428 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
UBE2D4-209ENST00000454428 H7BZZ5 65 aa4.69□□□□□ -1.66
UBE2D4-209ENST00000454428 MT3P25713 68 aa4.68□□□□□ -1.66
UBE2D4-209ENST00000454428 K7ERU9 68 aa4.6□□□□□ -1.67
UBE2D4-209ENST00000454428 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
UBE2D4-209ENST00000454428 PRR15LQ9BU68 103 aa4.58□□□□□ -1.68
UBE2D4-209ENST00000454428 COX7CP15954 63 aa4.55□□□□□ -1.68
UBE2D4-209ENST00000454428 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
UBE2D4-209ENST00000454428 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
UBE2D4-209ENST00000454428 UQCR11O14957 56 aa4.42□□□□□ -1.7
UBE2D4-209ENST00000454428 H3BS24 57 aa4.37□□□□□ -1.71
UBE2D4-209ENST00000454428 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
UBE2D4-209ENST00000454428 MIR22HGQ0VDD5 57 aa4.27□□□□□ -1.73
UBE2D4-209ENST00000454428 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
UBE2D4-209ENST00000454428 K7ERS5 55 aa4.23□□□□□ -1.73
UBE2D4-209ENST00000454428 SVIPQ8NHG7 77 aa4.18□□□□□ -1.74
UBE2D4-209ENST00000454428 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
UBE2D4-209ENST00000454428 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
UBE2D4-209ENST00000454428 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
UBE2D4-209ENST00000454428 ATP5EP56381 51 aaPredicted RBP4.08□□□□□ -1.76
UBE2D4-209ENST00000454428 CCDC179H3BU77 68 aa4.03□□□□□ -1.76
UBE2D4-209ENST00000454428 ANAPC13Q9BS18 74 aa3.99□□□□□ -1.77
UBE2D4-209ENST00000454428 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
UBE2D4-209ENST00000454428 Q1T7F1 81 aa3.96□□□□□ -1.78
UBE2D4-209ENST00000454428 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
UBE2D4-209ENST00000454428 ROMO1P60602 79 aa3.9□□□□□ -1.79
UBE2D4-209ENST00000454428 PSPHP1O15172 72 aa3.85□□□□□ -1.79
UBE2D4-209ENST00000454428 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
UBE2D4-209ENST00000454428 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
UBE2D4-209ENST00000454428 TMEM258P61165 79 aa3.75□□□□□ -1.81
UBE2D4-209ENST00000454428 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
UBE2D4-209ENST00000454428 V9GYY9 64 aa3.65□□□□□ -1.83
UBE2D4-209ENST00000454428 A6NED7 52 aa3.63□□□□□ -1.83
UBE2D4-209ENST00000454428 PCP4P48539 62 aa3.63□□□□□ -1.83
UBE2D4-209ENST00000454428 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
UBE2D4-209ENST00000454428 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
UBE2D4-209ENST00000454428 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
UBE2D4-209ENST00000454428 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
UBE2D4-209ENST00000454428 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
UBE2D4-209ENST00000454428 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
UBE2D4-209ENST00000454428 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
UBE2D4-209ENST00000454428 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
UBE2D4-209ENST00000454428 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
UBE2D4-209ENST00000454428 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
UBE2D4-209ENST00000454428 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
UBE2D4-209ENST00000454428 PMAIP1Q13794 54 aa2.11□□□□□ -2.07
UBE2D4-209ENST00000454428 PRO0628Q9UI54 55 aa2□□□□□ -2.09
UBE2D4-209ENST00000454428 PRM1P04553 51 aa1.98□□□□□ -2.09
UBE2D4-209ENST00000454428 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
UBE2D4-209ENST00000454428 KTN1-AS1Q86SY8 53 aa1.43□□□□□ -2.18
UBE2D4-209ENST00000454428 INE1O15225 51 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 79.9 ms