RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
TSFM-204ENST00000454289 MUC12Q9UKN1 5478 aa4.57□□□□□ -1.68
TSFM-204ENST00000454289 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
TSFM-204ENST00000454289 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
TSFM-204ENST00000454289 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
TSFM-204ENST00000454289 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
TSFM-204ENST00000454289 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
TSFM-204ENST00000454289 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
TSFM-204ENST00000454289 MT1GP13640 62 aa4.43□□□□□ -1.7
TSFM-204ENST00000454289 MT1MQ8N339 61 aa4.43□□□□□ -1.7
TSFM-204ENST00000454289 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
TSFM-204ENST00000454289 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
TSFM-204ENST00000454289 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
TSFM-204ENST00000454289 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.71
TSFM-204ENST00000454289 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
TSFM-204ENST00000454289 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
TSFM-204ENST00000454289 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
TSFM-204ENST00000454289 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
TSFM-204ENST00000454289 SPRR2EP22531 72 aa4.23□□□□□ -1.73
TSFM-204ENST00000454289 SPRR2BP35325 72 aa4.23□□□□□ -1.73
TSFM-204ENST00000454289 SPRR2AP35326 72 aa4.23□□□□□ -1.73
TSFM-204ENST00000454289 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
TSFM-204ENST00000454289 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
TSFM-204ENST00000454289 KRTAP2-3P0C7H8 128 aa4.14□□□□□ -1.75
TSFM-204ENST00000454289 KRTAP2-4Q9BYR9 128 aa4.14□□□□□ -1.75
TSFM-204ENST00000454289 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
TSFM-204ENST00000454289 LCE3BQ5TA77 95 aa4.09□□□□□ -1.75
TSFM-204ENST00000454289 SPRR2DP22532 72 aa4.07□□□□□ -1.76
TSFM-204ENST00000454289 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
TSFM-204ENST00000454289 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
TSFM-204ENST00000454289 NEBP20929 6669 aa4□□□□□ -1.77
TSFM-204ENST00000454289 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
TSFM-204ENST00000454289 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
TSFM-204ENST00000454289 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
TSFM-204ENST00000454289 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
TSFM-204ENST00000454289 MT1AP04731 61 aa3.92□□□□□ -1.78
TSFM-204ENST00000454289 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
TSFM-204ENST00000454289 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
TSFM-204ENST00000454289 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
TSFM-204ENST00000454289 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
TSFM-204ENST00000454289 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
TSFM-204ENST00000454289 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
TSFM-204ENST00000454289 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
TSFM-204ENST00000454289 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
TSFM-204ENST00000454289 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
TSFM-204ENST00000454289 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
TSFM-204ENST00000454289 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
TSFM-204ENST00000454289 MT4P47944 62 aa3.55□□□□□ -1.84
TSFM-204ENST00000454289 MT3P25713 68 aa3.53□□□□□ -1.84
TSFM-204ENST00000454289 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
TSFM-204ENST00000454289 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
TSFM-204ENST00000454289 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
TSFM-204ENST00000454289 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
TSFM-204ENST00000454289 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
TSFM-204ENST00000454289 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
TSFM-204ENST00000454289 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
TSFM-204ENST00000454289 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
TSFM-204ENST00000454289 PRM1P04553 51 aa3.08□□□□□ -1.92
TSFM-204ENST00000454289 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
TSFM-204ENST00000454289 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
TSFM-204ENST00000454289 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
TSFM-204ENST00000454289 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
TSFM-204ENST00000454289 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
TSFM-204ENST00000454289 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
TSFM-204ENST00000454289 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
TSFM-204ENST00000454289 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
TSFM-204ENST00000454289 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
TSFM-204ENST00000454289 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
TSFM-204ENST00000454289 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
TSFM-204ENST00000454289 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
TSFM-204ENST00000454289 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
TSFM-204ENST00000454289 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
TSFM-204ENST00000454289 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
TSFM-204ENST00000454289 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
TSFM-204ENST00000454289 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
TSFM-204ENST00000454289 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
TSFM-204ENST00000454289 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 71.4 ms