RNA–Protein interactions for RNA: ENST00000454189.6

GPM6B-205, Transcript of glycoprotein M6B, humanhuman

TSL 1 (best) BASIC

Gene GPM6B, Length 3,957 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-205ENST00000454189 KRTAP4-9Q9BYQ8 210 aa2.76□□□□□ -1.97
GPM6B-205ENST00000454189 USH2AO75445 5202 aa2.74□□□□□ -1.97
GPM6B-205ENST00000454189 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
GPM6B-205ENST00000454189 LCE3BQ5TA77 95 aa2.73□□□□□ -1.97
GPM6B-205ENST00000454189 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
GPM6B-205ENST00000454189 MT1EP04732 61 aa2.72□□□□□ -1.97
GPM6B-205ENST00000454189 MT1LQ93083 61 aa2.72□□□□□ -1.97
GPM6B-205ENST00000454189 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
GPM6B-205ENST00000454189 MT1GP13640 62 aa2.7□□□□□ -1.98
GPM6B-205ENST00000454189 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
GPM6B-205ENST00000454189 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
GPM6B-205ENST00000454189 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
GPM6B-205ENST00000454189 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
GPM6B-205ENST00000454189 KMT2DO14686 5537 aa2.64□□□□□ -1.99
GPM6B-205ENST00000454189 SPRR2EP22531 72 aa2.6□□□□□ -1.99
GPM6B-205ENST00000454189 SPRR2BP35325 72 aa2.6□□□□□ -1.99
GPM6B-205ENST00000454189 SPRR2AP35326 72 aa2.6□□□□□ -1.99
GPM6B-205ENST00000454189 MT1MQ8N339 61 aa2.59□□□□□ -2
GPM6B-205ENST00000454189 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
GPM6B-205ENST00000454189 KRTAP4-11Q9BYQ6 195 aa2.56□□□□□ -2
GPM6B-205ENST00000454189 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
GPM6B-205ENST00000454189 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
GPM6B-205ENST00000454189 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
GPM6B-205ENST00000454189 SSPOA2VEC9 5147 aa2.5□□□□□ -2.01
GPM6B-205ENST00000454189 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
GPM6B-205ENST00000454189 SPRR2DP22532 72 aa2.5□□□□□ -2.01
GPM6B-205ENST00000454189 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
GPM6B-205ENST00000454189 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
GPM6B-205ENST00000454189 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
GPM6B-205ENST00000454189 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
GPM6B-205ENST00000454189 MUC12Q9UKN1 5478 aa2.45□□□□□ -2.02
GPM6B-205ENST00000454189 LCE5AQ5TCM9 118 aa2.42□□□□□ -2.02
GPM6B-205ENST00000454189 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.02
GPM6B-205ENST00000454189 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
GPM6B-205ENST00000454189 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
GPM6B-205ENST00000454189 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
GPM6B-205ENST00000454189 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
GPM6B-205ENST00000454189 MT1AP04731 61 aa2.34□□□□□ -2.03
GPM6B-205ENST00000454189 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
GPM6B-205ENST00000454189 MT3P25713 68 aa2.27□□□□□ -2.05
GPM6B-205ENST00000454189 KRTAP6-3Q3LI67 103 aa2.27□□□□□ -2.05
GPM6B-205ENST00000454189 KRTAP5-9P26371 169 aa2.23□□□□□ -2.05
GPM6B-205ENST00000454189 MT4P47944 62 aa2.23□□□□□ -2.05
GPM6B-205ENST00000454189 KRTAP9-7A8MTY7 169 aa2.2□□□□□ -2.06
GPM6B-205ENST00000454189 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
GPM6B-205ENST00000454189 PRM1P04553 51 aa2.16□□□□□ -2.06
GPM6B-205ENST00000454189 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
GPM6B-205ENST00000454189 LCE4AQ5TA78 99 aa2.08□□□□□ -2.08
GPM6B-205ENST00000454189 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
GPM6B-205ENST00000454189 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
GPM6B-205ENST00000454189 KRTAP2-2Q9BYT5 123 aa2.03□□□□□ -2.08
GPM6B-205ENST00000454189 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
GPM6B-205ENST00000454189 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
GPM6B-205ENST00000454189 NEBP20929 6669 aa1.95□□□□□ -2.1
GPM6B-205ENST00000454189 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
GPM6B-205ENST00000454189 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
GPM6B-205ENST00000454189 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
GPM6B-205ENST00000454189 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.12
GPM6B-205ENST00000454189 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
GPM6B-205ENST00000454189 LCE1EQ5T753 118 aa1.68□□□□□ -2.14
GPM6B-205ENST00000454189 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
GPM6B-205ENST00000454189 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
GPM6B-205ENST00000454189 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
GPM6B-205ENST00000454189 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
GPM6B-205ENST00000454189 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
GPM6B-205ENST00000454189 LCE1FQ5T754 118 aa1.57□□□□□ -2.16
GPM6B-205ENST00000454189 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
GPM6B-205ENST00000454189 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
GPM6B-205ENST00000454189 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
GPM6B-205ENST00000454189 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
GPM6B-205ENST00000454189 KRTAP5-8O75690 187 aa1.46□□□□□ -2.18
GPM6B-205ENST00000454189 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
GPM6B-205ENST00000454189 KRTAP5-7Q6L8G8 165 aa1.26□□□□□ -2.21
GPM6B-205ENST00000454189 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
GPM6B-205ENST00000454189 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
GPM6B-205ENST00000454189 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
GPM6B-205ENST00000454189 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 113.2 ms