RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
LMBR1-213ENST00000454132 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
LMBR1-213ENST00000454132 DSTQ03001 7570 aaKnown RBP6.48□□□□□ -1.37
LMBR1-213ENST00000454132 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
LMBR1-213ENST00000454132 FCGBPQ9Y6R7 5405 aaPredicted RBP6.44□□□□□ -1.38
LMBR1-213ENST00000454132 MT1GP13640 62 aa6.42□□□□□ -1.38
LMBR1-213ENST00000454132 KRTAP12-4P60329 112 aa6.29□□□□□ -1.4
LMBR1-213ENST00000454132 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
LMBR1-213ENST00000454132 LCE2DQ5TA82 110 aaPredicted RBP6.18□□□□□ -1.42
LMBR1-213ENST00000454132 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
LMBR1-213ENST00000454132 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
LMBR1-213ENST00000454132 MT1MQ8N339 61 aa6.11□□□□□ -1.43
LMBR1-213ENST00000454132 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
LMBR1-213ENST00000454132 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
LMBR1-213ENST00000454132 OBSCNQ5VST9 7968 aa5.99□□□□□ -1.45
LMBR1-213ENST00000454132 KRTAP19-6Q3LI70 58 aa5.98□□□□□ -1.45
LMBR1-213ENST00000454132 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
LMBR1-213ENST00000454132 SPRR2FQ96RM1 72 aa5.81□□□□□ -1.48
LMBR1-213ENST00000454132 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
LMBR1-213ENST00000454132 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
LMBR1-213ENST00000454132 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
LMBR1-213ENST00000454132 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
LMBR1-213ENST00000454132 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
LMBR1-213ENST00000454132 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
LMBR1-213ENST00000454132 LCE3DQ9BYE3 92 aa5.65□□□□□ -1.51
LMBR1-213ENST00000454132 PRM1P04553 51 aa5.64□□□□□ -1.51
LMBR1-213ENST00000454132 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
LMBR1-213ENST00000454132 LCE3EQ5T5B0 92 aa5.57□□□□□ -1.52
LMBR1-213ENST00000454132 MT1AP04731 61 aa5.54□□□□□ -1.52
LMBR1-213ENST00000454132 KRTAP6-2Q3LI66 62 aa5.33□□□□□ -1.56
LMBR1-213ENST00000454132 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
LMBR1-213ENST00000454132 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
LMBR1-213ENST00000454132 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
LMBR1-213ENST00000454132 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
LMBR1-213ENST00000454132 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
LMBR1-213ENST00000454132 SPRR2EP22531 72 aa5.11□□□□□ -1.59
LMBR1-213ENST00000454132 SPRR2BP35325 72 aa5.11□□□□□ -1.59
LMBR1-213ENST00000454132 SPRR2AP35326 72 aa5.11□□□□□ -1.59
LMBR1-213ENST00000454132 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
LMBR1-213ENST00000454132 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
LMBR1-213ENST00000454132 SPRR2DP22532 72 aa4.9□□□□□ -1.63
LMBR1-213ENST00000454132 MT3P25713 68 aa4.89□□□□□ -1.63
LMBR1-213ENST00000454132 NEBP20929 6669 aa4.75□□□□□ -1.65
LMBR1-213ENST00000454132 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
LMBR1-213ENST00000454132 MT4P47944 62 aa4.49□□□□□ -1.69
LMBR1-213ENST00000454132 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
LMBR1-213ENST00000454132 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
LMBR1-213ENST00000454132 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
LMBR1-213ENST00000454132 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
LMBR1-213ENST00000454132 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
LMBR1-213ENST00000454132 HMCN1Q96RW7 5635 aa4.22□□□□□ -1.73
LMBR1-213ENST00000454132 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
LMBR1-213ENST00000454132 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
LMBR1-213ENST00000454132 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
LMBR1-213ENST00000454132 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
LMBR1-213ENST00000454132 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.75
LMBR1-213ENST00000454132 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
LMBR1-213ENST00000454132 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
LMBR1-213ENST00000454132 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
LMBR1-213ENST00000454132 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
LMBR1-213ENST00000454132 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
LMBR1-213ENST00000454132 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
LMBR1-213ENST00000454132 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.84
LMBR1-213ENST00000454132 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
LMBR1-213ENST00000454132 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
LMBR1-213ENST00000454132 KRTAP21-1Q3LI58 79 aa3.4□□□□□ -1.87
LMBR1-213ENST00000454132 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
LMBR1-213ENST00000454132 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.88
LMBR1-213ENST00000454132 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
LMBR1-213ENST00000454132 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
LMBR1-213ENST00000454132 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
LMBR1-213ENST00000454132 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
LMBR1-213ENST00000454132 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
LMBR1-213ENST00000454132 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
LMBR1-213ENST00000454132 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
LMBR1-213ENST00000454132 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
LMBR1-213ENST00000454132 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
LMBR1-213ENST00000454132 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms