RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 MT1GP13640 62 aa5.82□□□□□ -1.48
TCF3-204ENST00000453954 SYNE2Q8WXH0 6885 aaKnown RBP5.79□□□□□ -1.48
TCF3-204ENST00000453954 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
TCF3-204ENST00000453954 MT1LQ93083 61 aa5.76□□□□□ -1.49
TCF3-204ENST00000453954 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
TCF3-204ENST00000453954 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
TCF3-204ENST00000453954 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
TCF3-204ENST00000453954 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
TCF3-204ENST00000453954 MT1EP04732 61 aa5.69□□□□□ -1.5
TCF3-204ENST00000453954 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
TCF3-204ENST00000453954 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
TCF3-204ENST00000453954 SPRR2FQ96RM1 72 aa5.53□□□□□ -1.52
TCF3-204ENST00000453954 MT1MQ8N339 61 aa5.35□□□□□ -1.55
TCF3-204ENST00000453954 LCE2DQ5TA82 110 aaPredicted RBP5.31□□□□□ -1.56
TCF3-204ENST00000453954 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
TCF3-204ENST00000453954 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
TCF3-204ENST00000453954 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
TCF3-204ENST00000453954 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.58
TCF3-204ENST00000453954 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
TCF3-204ENST00000453954 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
TCF3-204ENST00000453954 LCE3DQ9BYE3 92 aa5.12□□□□□ -1.59
TCF3-204ENST00000453954 PRM1P04553 51 aa5.11□□□□□ -1.59
TCF3-204ENST00000453954 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
TCF3-204ENST00000453954 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
TCF3-204ENST00000453954 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
TCF3-204ENST00000453954 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.62
TCF3-204ENST00000453954 SPRR2EP22531 72 aa4.87□□□□□ -1.63
TCF3-204ENST00000453954 SPRR2BP35325 72 aa4.87□□□□□ -1.63
TCF3-204ENST00000453954 SPRR2AP35326 72 aa4.87□□□□□ -1.63
TCF3-204ENST00000453954 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
TCF3-204ENST00000453954 MT1AP04731 61 aa4.74□□□□□ -1.65
TCF3-204ENST00000453954 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
TCF3-204ENST00000453954 SPRR2DP22532 72 aa4.6□□□□□ -1.67
TCF3-204ENST00000453954 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
TCF3-204ENST00000453954 MUC19Q7Z5P9 8384 aa4.54□□□□□ -1.68
TCF3-204ENST00000453954 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
TCF3-204ENST00000453954 MT4P47944 62 aa4.43□□□□□ -1.7
TCF3-204ENST00000453954 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
TCF3-204ENST00000453954 MT3P25713 68 aa4.39□□□□□ -1.71
TCF3-204ENST00000453954 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
TCF3-204ENST00000453954 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
TCF3-204ENST00000453954 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
TCF3-204ENST00000453954 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
TCF3-204ENST00000453954 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
TCF3-204ENST00000453954 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
TCF3-204ENST00000453954 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
TCF3-204ENST00000453954 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
TCF3-204ENST00000453954 NEBP20929 6669 aa4.04□□□□□ -1.76
TCF3-204ENST00000453954 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
TCF3-204ENST00000453954 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
TCF3-204ENST00000453954 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
TCF3-204ENST00000453954 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
TCF3-204ENST00000453954 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
TCF3-204ENST00000453954 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
TCF3-204ENST00000453954 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
TCF3-204ENST00000453954 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
TCF3-204ENST00000453954 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
TCF3-204ENST00000453954 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
TCF3-204ENST00000453954 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
TCF3-204ENST00000453954 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
TCF3-204ENST00000453954 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
TCF3-204ENST00000453954 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
TCF3-204ENST00000453954 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
TCF3-204ENST00000453954 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
TCF3-204ENST00000453954 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
TCF3-204ENST00000453954 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
TCF3-204ENST00000453954 LCE1CQ5T751 118 aa3□□□□□ -1.93
TCF3-204ENST00000453954 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
TCF3-204ENST00000453954 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
TCF3-204ENST00000453954 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
TCF3-204ENST00000453954 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
TCF3-204ENST00000453954 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
TCF3-204ENST00000453954 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
TCF3-204ENST00000453954 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
TCF3-204ENST00000453954 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
TCF3-204ENST00000453954 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
TCF3-204ENST00000453954 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms