RNA–Protein interactions for RNA: ENST00000453908.7

SH3D21-201, Transcript of SH3 domain containing 21, humanhuman

APPRIS P1 TSL 5

Gene SH3D21, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-201ENST00000453908 KRTAP9-6A8MVA2 160 aa7.43□□□□□ -1.22
SH3D21-201ENST00000453908 MACF1Q9UPN3 7388 aaKnown RBP7.43□□□□□ -1.22
SH3D21-201ENST00000453908 KRTAP19-4Q3LI73 84 aa7.29□□□□□ -1.24
SH3D21-201ENST00000453908 SPRR2FQ96RM1 72 aa7.28□□□□□ -1.24
SH3D21-201ENST00000453908 KRTAP4-3Q9BYR4 195 aa7.26□□□□□ -1.25
SH3D21-201ENST00000453908 KRTAP19-3Q7Z4W3 81 aa7.25□□□□□ -1.25
SH3D21-201ENST00000453908 CRCT1Q9UGL9 99 aa7.23□□□□□ -1.25
SH3D21-201ENST00000453908 SYNE2Q8WXH0 6885 aaKnown RBP7.22□□□□□ -1.25
SH3D21-201ENST00000453908 MT1MQ8N339 61 aa7.18□□□□□ -1.26
SH3D21-201ENST00000453908 MT1GP13640 62 aa7.16□□□□□ -1.26
SH3D21-201ENST00000453908 LOC100996750A0A140TA64 210 aa7.11□□□□□ -1.27
SH3D21-201ENST00000453908 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
SH3D21-201ENST00000453908 LCE5AQ5TCM9 118 aa7.06□□□□□ -1.28
SH3D21-201ENST00000453908 MDN1Q9NU22 5596 aa7.03□□□□□ -1.28
SH3D21-201ENST00000453908 KRTAP2-3P0C7H8 128 aa6.93□□□□□ -1.3
SH3D21-201ENST00000453908 KRTAP2-4Q9BYR9 128 aa6.93□□□□□ -1.3
SH3D21-201ENST00000453908 KRTAP2-1Q9BYU5 128 aa6.93□□□□□ -1.3
SH3D21-201ENST00000453908 KRTAP5-9P26371 169 aa6.89□□□□□ -1.31
SH3D21-201ENST00000453908 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
SH3D21-201ENST00000453908 SPRR2EP22531 72 aa6.76□□□□□ -1.33
SH3D21-201ENST00000453908 SPRR2BP35325 72 aa6.76□□□□□ -1.33
SH3D21-201ENST00000453908 SPRR2AP35326 72 aa6.76□□□□□ -1.33
SH3D21-201ENST00000453908 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
SH3D21-201ENST00000453908 KRTAP9-6A0A140TA67 174 aa6.64□□□□□ -1.35
SH3D21-201ENST00000453908 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
SH3D21-201ENST00000453908 SPRR2DP22532 72 aa6.48□□□□□ -1.37
SH3D21-201ENST00000453908 KRTAP6-1Q3LI64 71 aa6.43□□□□□ -1.38
SH3D21-201ENST00000453908 LCE3BQ5TA77 95 aa6.42□□□□□ -1.38
SH3D21-201ENST00000453908 KRTAP5-5Q701N2 237 aaPredicted RBP6.38□□□□□ -1.39
SH3D21-201ENST00000453908 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
SH3D21-201ENST00000453908 MT1AP04731 61 aa6.35□□□□□ -1.39
SH3D21-201ENST00000453908 KRTAP4-9Q9BYQ8 210 aa6.22□□□□□ -1.41
SH3D21-201ENST00000453908 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
SH3D21-201ENST00000453908 KRTAP9-7A8MTY7 169 aa6.17□□□□□ -1.42
SH3D21-201ENST00000453908 NEBP20929 6669 aa6.15□□□□□ -1.43
SH3D21-201ENST00000453908 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
SH3D21-201ENST00000453908 LCE3DQ9BYE3 92 aa5.86□□□□□ -1.47
SH3D21-201ENST00000453908 KRTAP6-2Q3LI66 62 aa5.86□□□□□ -1.47
SH3D21-201ENST00000453908 KRTAP5-4Q6L8H1 288 aa5.84□□□□□ -1.47
SH3D21-201ENST00000453908 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
SH3D21-201ENST00000453908 MT4P47944 62 aa5.74□□□□□ -1.49
SH3D21-201ENST00000453908 MT3P25713 68 aa5.73□□□□□ -1.49
SH3D21-201ENST00000453908 LCE3EQ5T5B0 92 aa5.73□□□□□ -1.49
SH3D21-201ENST00000453908 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
SH3D21-201ENST00000453908 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
SH3D21-201ENST00000453908 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
SH3D21-201ENST00000453908 PRM1P04553 51 aa5.54□□□□□ -1.52
SH3D21-201ENST00000453908 KRTAP20-2Q3LI61 65 aa5.53□□□□□ -1.52
SH3D21-201ENST00000453908 HMCN1Q96RW7 5635 aa5.52□□□□□ -1.53
SH3D21-201ENST00000453908 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
SH3D21-201ENST00000453908 KRTAP20-1Q3LI63 56 aa5.45□□□□□ -1.54
SH3D21-201ENST00000453908 KRTAP5-2Q701N4 177 aa5.37□□□□□ -1.55
SH3D21-201ENST00000453908 KRTAP5-3Q6L8H2 238 aa5.27□□□□□ -1.57
SH3D21-201ENST00000453908 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
SH3D21-201ENST00000453908 LCE1EQ5T753 118 aa4.78□□□□□ -1.64
SH3D21-201ENST00000453908 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
SH3D21-201ENST00000453908 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
SH3D21-201ENST00000453908 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
SH3D21-201ENST00000453908 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.67
SH3D21-201ENST00000453908 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
SH3D21-201ENST00000453908 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
SH3D21-201ENST00000453908 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
SH3D21-201ENST00000453908 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
SH3D21-201ENST00000453908 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
SH3D21-201ENST00000453908 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
SH3D21-201ENST00000453908 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
SH3D21-201ENST00000453908 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
SH3D21-201ENST00000453908 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
SH3D21-201ENST00000453908 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.75
SH3D21-201ENST00000453908 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
SH3D21-201ENST00000453908 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
SH3D21-201ENST00000453908 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
SH3D21-201ENST00000453908 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
SH3D21-201ENST00000453908 KRTAP21-1Q3LI58 79 aa3.52□□□□□ -1.85
SH3D21-201ENST00000453908 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
SH3D21-201ENST00000453908 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
SH3D21-201ENST00000453908 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
SH3D21-201ENST00000453908 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 82.6 ms