RNA–Protein interactions for RNA: ENST00000453634.5

CHKB-CPT1B-202, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHKB-CPT1B, Length 2,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-202ENST00000453634 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
CHKB-CPT1B-202ENST00000453634 KRTAP9-2Q9BYQ4 174 aa3.51□□□□□ -1.85
CHKB-CPT1B-202ENST00000453634 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
CHKB-CPT1B-202ENST00000453634 MT1GP13640 62 aa3.5□□□□□ -1.85
CHKB-CPT1B-202ENST00000453634 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
CHKB-CPT1B-202ENST00000453634 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
CHKB-CPT1B-202ENST00000453634 MT1MQ8N339 61 aa3.46□□□□□ -1.86
CHKB-CPT1B-202ENST00000453634 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.86
CHKB-CPT1B-202ENST00000453634 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
CHKB-CPT1B-202ENST00000453634 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
CHKB-CPT1B-202ENST00000453634 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
CHKB-CPT1B-202ENST00000453634 LCE2DQ5TA82 110 aaPredicted RBP3.43□□□□□ -1.86
CHKB-CPT1B-202ENST00000453634 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
CHKB-CPT1B-202ENST00000453634 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
CHKB-CPT1B-202ENST00000453634 MT1AP04731 61 aa3.36□□□□□ -1.87
CHKB-CPT1B-202ENST00000453634 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
CHKB-CPT1B-202ENST00000453634 LCE3BQ5TA77 95 aa3.3□□□□□ -1.88
CHKB-CPT1B-202ENST00000453634 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
CHKB-CPT1B-202ENST00000453634 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
CHKB-CPT1B-202ENST00000453634 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
CHKB-CPT1B-202ENST00000453634 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
CHKB-CPT1B-202ENST00000453634 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
CHKB-CPT1B-202ENST00000453634 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
CHKB-CPT1B-202ENST00000453634 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
CHKB-CPT1B-202ENST00000453634 PRM1P04553 51 aa3.17□□□□□ -1.9
CHKB-CPT1B-202ENST00000453634 KRTAP9-7A8MTY7 169 aa3.16□□□□□ -1.9
CHKB-CPT1B-202ENST00000453634 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
CHKB-CPT1B-202ENST00000453634 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
CHKB-CPT1B-202ENST00000453634 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
CHKB-CPT1B-202ENST00000453634 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
CHKB-CPT1B-202ENST00000453634 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
CHKB-CPT1B-202ENST00000453634 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
CHKB-CPT1B-202ENST00000453634 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
CHKB-CPT1B-202ENST00000453634 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.94
CHKB-CPT1B-202ENST00000453634 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
CHKB-CPT1B-202ENST00000453634 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
CHKB-CPT1B-202ENST00000453634 MT3P25713 68 aa2.83□□□□□ -1.96
CHKB-CPT1B-202ENST00000453634 SPRR2AP35326 72 aa2.81□□□□□ -1.96
CHKB-CPT1B-202ENST00000453634 SPRR2EP22531 72 aa2.8□□□□□ -1.96
CHKB-CPT1B-202ENST00000453634 SPRR2BP35325 72 aa2.8□□□□□ -1.96
CHKB-CPT1B-202ENST00000453634 NEBP20929 6669 aa2.74□□□□□ -1.97
CHKB-CPT1B-202ENST00000453634 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
CHKB-CPT1B-202ENST00000453634 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
CHKB-CPT1B-202ENST00000453634 SPRR2DP22532 72 aa2.66□□□□□ -1.98
CHKB-CPT1B-202ENST00000453634 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
CHKB-CPT1B-202ENST00000453634 LCE1DQ5T752 114 aa2.56□□□□□ -2
CHKB-CPT1B-202ENST00000453634 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
CHKB-CPT1B-202ENST00000453634 MT4P47944 62 aa2.5□□□□□ -2.01
CHKB-CPT1B-202ENST00000453634 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
CHKB-CPT1B-202ENST00000453634 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
CHKB-CPT1B-202ENST00000453634 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
CHKB-CPT1B-202ENST00000453634 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
CHKB-CPT1B-202ENST00000453634 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
CHKB-CPT1B-202ENST00000453634 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
CHKB-CPT1B-202ENST00000453634 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
CHKB-CPT1B-202ENST00000453634 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
CHKB-CPT1B-202ENST00000453634 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
CHKB-CPT1B-202ENST00000453634 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
CHKB-CPT1B-202ENST00000453634 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
CHKB-CPT1B-202ENST00000453634 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
CHKB-CPT1B-202ENST00000453634 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
CHKB-CPT1B-202ENST00000453634 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
CHKB-CPT1B-202ENST00000453634 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
CHKB-CPT1B-202ENST00000453634 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
CHKB-CPT1B-202ENST00000453634 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
CHKB-CPT1B-202ENST00000453634 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
CHKB-CPT1B-202ENST00000453634 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
CHKB-CPT1B-202ENST00000453634 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CHKB-CPT1B-202ENST00000453634 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
CHKB-CPT1B-202ENST00000453634 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
CHKB-CPT1B-202ENST00000453634 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
CHKB-CPT1B-202ENST00000453634 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
CHKB-CPT1B-202ENST00000453634 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
CHKB-CPT1B-202ENST00000453634 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
CHKB-CPT1B-202ENST00000453634 KRTAP4-12Q9BQ66 201 aa1.79□□□□□ -2.12
CHKB-CPT1B-202ENST00000453634 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
CHKB-CPT1B-202ENST00000453634 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 35.3 ms