RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
PUF60-203ENST00000453551 KRTAP2-3P0C7H8 128 aa7.2□□□□□ -1.26
PUF60-203ENST00000453551 KRTAP2-4Q9BYR9 128 aa7.2□□□□□ -1.26
PUF60-203ENST00000453551 KRTAP2-1Q9BYU5 128 aa7.2□□□□□ -1.26
PUF60-203ENST00000453551 FCGBPQ9Y6R7 5405 aaPredicted RBP7.07□□□□□ -1.28
PUF60-203ENST00000453551 KRTAP19-3Q7Z4W3 81 aa7□□□□□ -1.29
PUF60-203ENST00000453551 MT1GP13640 62 aa6.99□□□□□ -1.29
PUF60-203ENST00000453551 MT1MQ8N339 61 aa6.97□□□□□ -1.29
PUF60-203ENST00000453551 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.85□□□□□ -1.31
PUF60-203ENST00000453551 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
PUF60-203ENST00000453551 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
PUF60-203ENST00000453551 LOC100996750A0A140TA64 210 aa6.78□□□□□ -1.32
PUF60-203ENST00000453551 MACF1Q9UPN3 7388 aaKnown RBP6.77□□□□□ -1.33
PUF60-203ENST00000453551 SPRR2FQ96RM1 72 aa6.71□□□□□ -1.34
PUF60-203ENST00000453551 KRTAP9-7A8MTY7 169 aa6.67□□□□□ -1.34
PUF60-203ENST00000453551 SYNE2Q8WXH0 6885 aaKnown RBP6.65□□□□□ -1.34
PUF60-203ENST00000453551 MUC12Q9UKN1 5478 aa6.64□□□□□ -1.35
PUF60-203ENST00000453551 KRTAP6-3Q3LI67 103 aa6.51□□□□□ -1.37
PUF60-203ENST00000453551 KRTAP5-9P26371 169 aa6.46□□□□□ -1.38
PUF60-203ENST00000453551 LCE1AQ5T7P2 110 aa6.36□□□□□ -1.39
PUF60-203ENST00000453551 MT1AP04731 61 aa6.3□□□□□ -1.4
PUF60-203ENST00000453551 KRTAP6-1Q3LI64 71 aa6.23□□□□□ -1.41
PUF60-203ENST00000453551 KRTAP5-5Q701N2 237 aaPredicted RBP6.23□□□□□ -1.41
PUF60-203ENST00000453551 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
PUF60-203ENST00000453551 MDN1Q9NU22 5596 aa6.21□□□□□ -1.42
PUF60-203ENST00000453551 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
PUF60-203ENST00000453551 SPRR2EP22531 72 aa6.18□□□□□ -1.42
PUF60-203ENST00000453551 SPRR2BP35325 72 aa6.18□□□□□ -1.42
PUF60-203ENST00000453551 SPRR2AP35326 72 aa6.18□□□□□ -1.42
PUF60-203ENST00000453551 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
PUF60-203ENST00000453551 NEBP20929 6669 aa6.1□□□□□ -1.43
PUF60-203ENST00000453551 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
PUF60-203ENST00000453551 SPRR2DP22532 72 aa5.93□□□□□ -1.46
PUF60-203ENST00000453551 LCE3DQ9BYE3 92 aa5.92□□□□□ -1.46
PUF60-203ENST00000453551 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
PUF60-203ENST00000453551 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
PUF60-203ENST00000453551 KRTAP20-1Q3LI63 56 aa5.87□□□□□ -1.47
PUF60-203ENST00000453551 LCE3EQ5T5B0 92 aa5.86□□□□□ -1.47
PUF60-203ENST00000453551 KRTAP2-2Q9BYT5 123 aa5.66□□□□□ -1.5
PUF60-203ENST00000453551 MT3P25713 68 aa5.64□□□□□ -1.51
PUF60-203ENST00000453551 KRTAP6-2Q3LI66 62 aa5.6□□□□□ -1.51
PUF60-203ENST00000453551 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
PUF60-203ENST00000453551 PRM1P04553 51 aa5.46□□□□□ -1.54
PUF60-203ENST00000453551 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
PUF60-203ENST00000453551 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
PUF60-203ENST00000453551 MT4P47944 62 aa5.19□□□□□ -1.58
PUF60-203ENST00000453551 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
PUF60-203ENST00000453551 KRTAP20-2Q3LI61 65 aa5.18□□□□□ -1.58
PUF60-203ENST00000453551 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
PUF60-203ENST00000453551 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
PUF60-203ENST00000453551 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
PUF60-203ENST00000453551 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
PUF60-203ENST00000453551 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
PUF60-203ENST00000453551 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
PUF60-203ENST00000453551 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
PUF60-203ENST00000453551 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.67
PUF60-203ENST00000453551 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
PUF60-203ENST00000453551 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
PUF60-203ENST00000453551 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
PUF60-203ENST00000453551 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
PUF60-203ENST00000453551 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
PUF60-203ENST00000453551 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
PUF60-203ENST00000453551 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
PUF60-203ENST00000453551 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
PUF60-203ENST00000453551 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
PUF60-203ENST00000453551 KRTAP21-2Q3LI59 83 aa4.08□□□□□ -1.76
PUF60-203ENST00000453551 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
PUF60-203ENST00000453551 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
PUF60-203ENST00000453551 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
PUF60-203ENST00000453551 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
PUF60-203ENST00000453551 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
PUF60-203ENST00000453551 KRTAP21-1Q3LI58 79 aa3.51□□□□□ -1.85
PUF60-203ENST00000453551 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
PUF60-203ENST00000453551 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
PUF60-203ENST00000453551 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
PUF60-203ENST00000453551 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
PUF60-203ENST00000453551 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 86.1 ms