RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 KRTAP4-9Q9BYQ8 210 aa10.51□□□□□ -0.73
CCDC117-206ENST00000453543 MIR22HGQ0VDD5 57 aa10.49□□□□□ -0.73
CCDC117-206ENST00000453543 V9GYY9 64 aa10.49□□□□□ -0.73
CCDC117-206ENST00000453543 Q1T7F1 81 aa10.44□□□□□ -0.74
CCDC117-206ENST00000453543 KRTAP4-3Q9BYR4 195 aa10.44□□□□□ -0.74
CCDC117-206ENST00000453543 KRTAP12-3P60328 96 aa10.38□□□□□ -0.75
CCDC117-206ENST00000453543 PSPHP1O15172 72 aa10.35□□□□□ -0.75
CCDC117-206ENST00000453543 RPS28P62857 69 aaKnown RBP10.33□□□□□ -0.76
CCDC117-206ENST00000453543 LCE1DQ5T752 114 aa10.27□□□□□ -0.77
CCDC117-206ENST00000453543 KRTAP25-1Q3LHN0 102 aa10.26□□□□□ -0.77
CCDC117-206ENST00000453543 LCE4AQ5TA78 99 aa10.25□□□□□ -0.77
CCDC117-206ENST00000453543 K7ERS5 55 aa10.24□□□□□ -0.77
CCDC117-206ENST00000453543 KRTAP4-7Q9BYR0 210 aa10.22□□□□□ -0.77
CCDC117-206ENST00000453543 MT4P47944 62 aa10.17□□□□□ -0.78
CCDC117-206ENST00000453543 KRTAP5-4Q6L8H1 288 aa10.1□□□□□ -0.79
CCDC117-206ENST00000453543 GPR98Q8WXG9 6306 aa10.07□□□□□ -0.8
CCDC117-206ENST00000453543 HMCN1Q96RW7 5635 aa10.06□□□□□ -0.8
CCDC117-206ENST00000453543 A6NED7 52 aa10.01□□□□□ -0.81
CCDC117-206ENST00000453543 KRTAP4-6Q9BYQ5 205 aa9.9□□□□□ -0.82
CCDC117-206ENST00000453543 KRTAP23-1A1A580 65 aa9.85□□□□□ -0.83
CCDC117-206ENST00000453543 KRTAP5-5Q701N2 237 aaPredicted RBP9.76□□□□□ -0.85
CCDC117-206ENST00000453543 CDC42SE1Q9NRR8 79 aa9.73□□□□□ -0.85
CCDC117-206ENST00000453543 KRTAP15-1Q3LI76 137 aa9.71□□□□□ -0.86
CCDC117-206ENST00000453543 KRTAP19-4Q3LI73 84 aa9.7□□□□□ -0.86
CCDC117-206ENST00000453543 LOC100996750A0A140TA64 210 aa9.68□□□□□ -0.86
CCDC117-206ENST00000453543 AHNAK2Q8IVF2 5795 aa9.67□□□□□ -0.86
CCDC117-206ENST00000453543 ROMO1P60602 79 aa9.59□□□□□ -0.87
CCDC117-206ENST00000453543 LCE3CQ5T5A8 94 aa9.56□□□□□ -0.88
CCDC117-206ENST00000453543 KRTAP20-2Q3LI61 65 aa9.54□□□□□ -0.88
CCDC117-206ENST00000453543 KRTAP5-10Q6L8G5 202 aa9.5□□□□□ -0.89
CCDC117-206ENST00000453543 SPRR5A0A1B0GTR4 108 aa9.46□□□□□ -0.9
CCDC117-206ENST00000453543 KRTAP12-4P60329 112 aa9.44□□□□□ -0.9
CCDC117-206ENST00000453543 SYNE1Q8NF91 8797 aaKnown RBP9.31□□□□□ -0.92
CCDC117-206ENST00000453543 KRTAP5-3Q6L8H2 238 aa9.3□□□□□ -0.92
CCDC117-206ENST00000453543 MT1AP04731 61 aa9.1□□□□□ -0.95
CCDC117-206ENST00000453543 KRTAP5-7Q6L8G8 165 aa9.1□□□□□ -0.95
CCDC117-206ENST00000453543 BRK1Q8WUW1 75 aa9.1□□□□□ -0.95
CCDC117-206ENST00000453543 KRTAP9-6A8MVA2 160 aa9.07□□□□□ -0.96
CCDC117-206ENST00000453543 KRTAP6-1Q3LI64 71 aa9.07□□□□□ -0.96
CCDC117-206ENST00000453543 KRTAP5-2Q701N4 177 aa8.87□□□□□ -0.99
CCDC117-206ENST00000453543 KRTAP9-4Q9BYQ2 154 aa8.78□□□□□ -1
CCDC117-206ENST00000453543 KRTAP4-11Q9BYQ6 195 aa8.67□□□□□ -1.02
CCDC117-206ENST00000453543 KRTAP6-2Q3LI66 62 aa8.64□□□□□ -1.03
CCDC117-206ENST00000453543 PMAIP1Q13794 54 aa8.58□□□□□ -1.04
CCDC117-206ENST00000453543 KRTAP5-8O75690 187 aa8.4□□□□□ -1.06
CCDC117-206ENST00000453543 PRO0628Q9UI54 55 aa8.35□□□□□ -1.07
CCDC117-206ENST00000453543 MT3P25713 68 aa8.29□□□□□ -1.08
CCDC117-206ENST00000453543 OBSCNQ5VST9 7968 aa8.23□□□□□ -1.09
CCDC117-206ENST00000453543 PRAC1Q96KF2 57 aa8.15□□□□□ -1.1
CCDC117-206ENST00000453543 KRTAP5-1Q6L8H4 278 aa7.94□□□□□ -1.14
CCDC117-206ENST00000453543 KRTAP9-9Q9BYP9 154 aa7.92□□□□□ -1.14
CCDC117-206ENST00000453543 MUC5ACP98088 5654 aa7.91□□□□□ -1.14
CCDC117-206ENST00000453543 MUC5BQ9HC84 5762 aaPredicted RBP7.89□□□□□ -1.15
CCDC117-206ENST00000453543 KTN1-AS1Q86SY8 53 aa7.88□□□□□ -1.15
CCDC117-206ENST00000453543 AHNAKQ09666 5890 aaKnown RBP7.86□□□□□ -1.15
CCDC117-206ENST00000453543 LCE1EQ5T753 118 aa7.59□□□□□ -1.19
CCDC117-206ENST00000453543 SVIPQ8NHG7 77 aa7.46□□□□□ -1.22
CCDC117-206ENST00000453543 KRTAP4-2Q9BYR5 136 aa7.21□□□□□ -1.26
CCDC117-206ENST00000453543 LCE1BQ5T7P3 118 aa7.19□□□□□ -1.26
CCDC117-206ENST00000453543 KRTAP4-12Q9BQ66 201 aa7.13□□□□□ -1.27
CCDC117-206ENST00000453543 LCE1CQ5T751 118 aa7.05□□□□□ -1.28
CCDC117-206ENST00000453543 LCE3DQ9BYE3 92 aa6.89□□□□□ -1.31
CCDC117-206ENST00000453543 LUZP6Q538Z0 58 aa6.82□□□□□ -1.32
CCDC117-206ENST00000453543 LCE3EQ5T5B0 92 aa6.49□□□□□ -1.37
CCDC117-206ENST00000453543 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.43□□□□□ -1.38
CCDC117-206ENST00000453543 KRTAP5-11Q6L8G4 156 aa6.4□□□□□ -1.38
CCDC117-206ENST00000453543 LCE1FQ5T754 118 aa6.17□□□□□ -1.42
CCDC117-206ENST00000453543 KRTAP21-2Q3LI59 83 aa5.96□□□□□ -1.46
CCDC117-206ENST00000453543 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
CCDC117-206ENST00000453543 PHGR1C9JFL3 82 aa5.53□□□□□ -1.52
CCDC117-206ENST00000453543 KRTAP4-4Q9BYR3 166 aa5.48□□□□□ -1.53
CCDC117-206ENST00000453543 H3BS24 57 aa5.2□□□□□ -1.58
CCDC117-206ENST00000453543 MUC19Q7Z5P9 8384 aa5.06□□□□□ -1.6
CCDC117-206ENST00000453543 PRM1P04553 51 aa4.94□□□□□ -1.62
CCDC117-206ENST00000453543 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
CCDC117-206ENST00000453543 INE1O15225 51 aa4.84□□□□□ -1.63
CCDC117-206ENST00000453543 KRTAP21-1Q3LI58 79 aa4.17□□□□□ -1.74
CCDC117-206ENST00000453543 MUC16Q8WXI7 14507 aa3.63□□□□□ -1.83
Retrieved 78 of 20,778 RNA–protein pairs in 60.7 ms