RNA–Protein interactions for RNA: ENST00000453246.5

ABCA13-205, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-205ENST00000453246 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
ABCA13-205ENST00000453246 MT1LQ93083 61 aa3.32□□□□□ -1.88
ABCA13-205ENST00000453246 SPRR2DP22532 72 aa3.31□□□□□ -1.88
ABCA13-205ENST00000453246 MT1EP04732 61 aa3.3□□□□□ -1.88
ABCA13-205ENST00000453246 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
ABCA13-205ENST00000453246 KMT2DO14686 5537 aa3.29□□□□□ -1.88
ABCA13-205ENST00000453246 LCE2AQ5TA79 106 aaPredicted RBP3.28□□□□□ -1.88
ABCA13-205ENST00000453246 SYNE2Q8WXH0 6885 aaKnown RBP3.27□□□□□ -1.89
ABCA13-205ENST00000453246 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
ABCA13-205ENST00000453246 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
ABCA13-205ENST00000453246 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.9
ABCA13-205ENST00000453246 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
ABCA13-205ENST00000453246 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
ABCA13-205ENST00000453246 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
ABCA13-205ENST00000453246 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
ABCA13-205ENST00000453246 MT1MQ8N339 61 aa3.13□□□□□ -1.91
ABCA13-205ENST00000453246 KRTAP9-2Q9BYQ4 174 aa3.1□□□□□ -1.91
ABCA13-205ENST00000453246 LCE2DQ5TA82 110 aaPredicted RBP3.1□□□□□ -1.91
ABCA13-205ENST00000453246 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
ABCA13-205ENST00000453246 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
ABCA13-205ENST00000453246 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
ABCA13-205ENST00000453246 MT4P47944 62 aa3.08□□□□□ -1.92
ABCA13-205ENST00000453246 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
ABCA13-205ENST00000453246 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
ABCA13-205ENST00000453246 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
ABCA13-205ENST00000453246 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
ABCA13-205ENST00000453246 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
ABCA13-205ENST00000453246 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
ABCA13-205ENST00000453246 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
ABCA13-205ENST00000453246 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
ABCA13-205ENST00000453246 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
ABCA13-205ENST00000453246 PRM1P04553 51 aa2.91□□□□□ -1.94
ABCA13-205ENST00000453246 MT3P25713 68 aa2.86□□□□□ -1.95
ABCA13-205ENST00000453246 LCE5AQ5TCM9 118 aa2.86□□□□□ -1.95
ABCA13-205ENST00000453246 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
ABCA13-205ENST00000453246 MT1AP04731 61 aa2.83□□□□□ -1.96
ABCA13-205ENST00000453246 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
ABCA13-205ENST00000453246 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
ABCA13-205ENST00000453246 KRTAP9-7A8MTY7 169 aa2.81□□□□□ -1.96
ABCA13-205ENST00000453246 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
ABCA13-205ENST00000453246 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
ABCA13-205ENST00000453246 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.98
ABCA13-205ENST00000453246 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.64□□□□□ -1.99
ABCA13-205ENST00000453246 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
ABCA13-205ENST00000453246 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
ABCA13-205ENST00000453246 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
ABCA13-205ENST00000453246 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
ABCA13-205ENST00000453246 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
ABCA13-205ENST00000453246 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
ABCA13-205ENST00000453246 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
ABCA13-205ENST00000453246 NEBP20929 6669 aa2.5□□□□□ -2.01
ABCA13-205ENST00000453246 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
ABCA13-205ENST00000453246 LCE4AQ5TA78 99 aa2.4□□□□□ -2.02
ABCA13-205ENST00000453246 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
ABCA13-205ENST00000453246 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
ABCA13-205ENST00000453246 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
ABCA13-205ENST00000453246 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
ABCA13-205ENST00000453246 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
ABCA13-205ENST00000453246 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
ABCA13-205ENST00000453246 KRTAP4-12Q9BQ66 201 aa2.12□□□□□ -2.07
ABCA13-205ENST00000453246 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
ABCA13-205ENST00000453246 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
ABCA13-205ENST00000453246 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
ABCA13-205ENST00000453246 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
ABCA13-205ENST00000453246 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.1
ABCA13-205ENST00000453246 KRTAP5-3Q6L8H2 238 aa1.86□□□□□ -2.11
ABCA13-205ENST00000453246 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
ABCA13-205ENST00000453246 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
ABCA13-205ENST00000453246 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
ABCA13-205ENST00000453246 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
ABCA13-205ENST00000453246 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
ABCA13-205ENST00000453246 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
ABCA13-205ENST00000453246 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
ABCA13-205ENST00000453246 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
ABCA13-205ENST00000453246 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
ABCA13-205ENST00000453246 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
ABCA13-205ENST00000453246 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
ABCA13-205ENST00000453246 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms