RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 PRR15LQ9BU68 103 aa4.45□□□□□ -1.7
CSNK1E-211ENST00000451964 MT1GP13640 62 aa4.44□□□□□ -1.7
CSNK1E-211ENST00000451964 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
CSNK1E-211ENST00000451964 TNP1P09430 55 aa4.41□□□□□ -1.7
CSNK1E-211ENST00000451964 TMEM258P61165 79 aa4.4□□□□□ -1.71
CSNK1E-211ENST00000451964 MT1LQ93083 61 aa4.4□□□□□ -1.71
CSNK1E-211ENST00000451964 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
CSNK1E-211ENST00000451964 MT1MQ8N339 61 aa4.38□□□□□ -1.71
CSNK1E-211ENST00000451964 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
CSNK1E-211ENST00000451964 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
CSNK1E-211ENST00000451964 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
CSNK1E-211ENST00000451964 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
CSNK1E-211ENST00000451964 UQCR11O14957 56 aa4.33□□□□□ -1.72
CSNK1E-211ENST00000451964 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
CSNK1E-211ENST00000451964 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
CSNK1E-211ENST00000451964 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
CSNK1E-211ENST00000451964 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
CSNK1E-211ENST00000451964 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
CSNK1E-211ENST00000451964 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
CSNK1E-211ENST00000451964 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
CSNK1E-211ENST00000451964 MT4P47944 62 aa4.19□□□□□ -1.74
CSNK1E-211ENST00000451964 PSPHP1O15172 72 aa4.18□□□□□ -1.74
CSNK1E-211ENST00000451964 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
CSNK1E-211ENST00000451964 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
CSNK1E-211ENST00000451964 Q1T7F1 81 aa4.15□□□□□ -1.75
CSNK1E-211ENST00000451964 V9GYY9 64 aa4.14□□□□□ -1.75
CSNK1E-211ENST00000451964 K7ERS5 55 aa4.11□□□□□ -1.75
CSNK1E-211ENST00000451964 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
CSNK1E-211ENST00000451964 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
CSNK1E-211ENST00000451964 A6NED7 52 aa4.01□□□□□ -1.77
CSNK1E-211ENST00000451964 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
CSNK1E-211ENST00000451964 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
CSNK1E-211ENST00000451964 RPS28P62857 69 aaKnown RBP3.93□□□□□ -1.78
CSNK1E-211ENST00000451964 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
CSNK1E-211ENST00000451964 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
CSNK1E-211ENST00000451964 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
CSNK1E-211ENST00000451964 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
CSNK1E-211ENST00000451964 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
CSNK1E-211ENST00000451964 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
CSNK1E-211ENST00000451964 ROMO1P60602 79 aa3.88□□□□□ -1.79
CSNK1E-211ENST00000451964 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
CSNK1E-211ENST00000451964 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
CSNK1E-211ENST00000451964 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
CSNK1E-211ENST00000451964 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
CSNK1E-211ENST00000451964 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
CSNK1E-211ENST00000451964 MT1AP04731 61 aa3.73□□□□□ -1.81
CSNK1E-211ENST00000451964 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
CSNK1E-211ENST00000451964 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
CSNK1E-211ENST00000451964 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
CSNK1E-211ENST00000451964 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
CSNK1E-211ENST00000451964 MT3P25713 68 aa3.5□□□□□ -1.85
CSNK1E-211ENST00000451964 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
CSNK1E-211ENST00000451964 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
CSNK1E-211ENST00000451964 BRK1Q8WUW1 75 aa3.42□□□□□ -1.86
CSNK1E-211ENST00000451964 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
CSNK1E-211ENST00000451964 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.86
CSNK1E-211ENST00000451964 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
CSNK1E-211ENST00000451964 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
CSNK1E-211ENST00000451964 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
CSNK1E-211ENST00000451964 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
CSNK1E-211ENST00000451964 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
CSNK1E-211ENST00000451964 PRO0628Q9UI54 55 aa3.02□□□□□ -1.93
CSNK1E-211ENST00000451964 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
CSNK1E-211ENST00000451964 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
CSNK1E-211ENST00000451964 KTN1-AS1Q86SY8 53 aa2.83□□□□□ -1.96
CSNK1E-211ENST00000451964 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
CSNK1E-211ENST00000451964 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
CSNK1E-211ENST00000451964 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
CSNK1E-211ENST00000451964 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
CSNK1E-211ENST00000451964 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
CSNK1E-211ENST00000451964 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
CSNK1E-211ENST00000451964 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
CSNK1E-211ENST00000451964 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
CSNK1E-211ENST00000451964 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
CSNK1E-211ENST00000451964 PRM1P04553 51 aa2□□□□□ -2.09
CSNK1E-211ENST00000451964 INE1O15225 51 aa1.84□□□□□ -2.11
CSNK1E-211ENST00000451964 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
CSNK1E-211ENST00000451964 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 69.1 ms