RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 KRTAP2-4Q9BYR9 128 aa7.47□□□□□ -1.21
TTC3-210ENST00000450533 KRTAP2-1Q9BYU5 128 aa7.47□□□□□ -1.21
TTC3-210ENST00000450533 MUC12Q9UKN1 5478 aa7.42□□□□□ -1.22
TTC3-210ENST00000450533 KRTAP4-3Q9BYR4 195 aa7.37□□□□□ -1.23
TTC3-210ENST00000450533 LCE2DQ5TA82 110 aaPredicted RBP7.34□□□□□ -1.23
TTC3-210ENST00000450533 LOC100996750A0A140TA64 210 aa7.32□□□□□ -1.24
TTC3-210ENST00000450533 MT1GP13640 62 aa7.24□□□□□ -1.25
TTC3-210ENST00000450533 KRTAP19-3Q7Z4W3 81 aa7.21□□□□□ -1.26
TTC3-210ENST00000450533 MT1MQ8N339 61 aa7.21□□□□□ -1.26
TTC3-210ENST00000450533 DSTQ03001 7570 aaKnown RBP7.13□□□□□ -1.27
TTC3-210ENST00000450533 CRCT1Q9UGL9 99 aa7.13□□□□□ -1.27
TTC3-210ENST00000450533 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
TTC3-210ENST00000450533 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
TTC3-210ENST00000450533 LCE5AQ5TCM9 118 aa6.96□□□□□ -1.29
TTC3-210ENST00000450533 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
TTC3-210ENST00000450533 MDN1Q9NU22 5596 aa6.75□□□□□ -1.33
TTC3-210ENST00000450533 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
TTC3-210ENST00000450533 KRTAP12-4P60329 112 aa6.65□□□□□ -1.34
TTC3-210ENST00000450533 SYNE1Q8NF91 8797 aaKnown RBP6.58□□□□□ -1.36
TTC3-210ENST00000450533 KRTAP4-9Q9BYQ8 210 aa6.57□□□□□ -1.36
TTC3-210ENST00000450533 KRTAP6-1Q3LI64 71 aa6.56□□□□□ -1.36
TTC3-210ENST00000450533 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
TTC3-210ENST00000450533 LCE1AQ5T7P2 110 aa6.53□□□□□ -1.36
TTC3-210ENST00000450533 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
TTC3-210ENST00000450533 MT1AP04731 61 aa6.43□□□□□ -1.38
TTC3-210ENST00000450533 SPRR2EP22531 72 aa6.39□□□□□ -1.39
TTC3-210ENST00000450533 SPRR2BP35325 72 aa6.39□□□□□ -1.39
TTC3-210ENST00000450533 SPRR2AP35326 72 aa6.39□□□□□ -1.39
TTC3-210ENST00000450533 KRTAP5-5Q701N2 237 aaPredicted RBP6.35□□□□□ -1.39
TTC3-210ENST00000450533 LCE3DQ9BYE3 92 aa6.24□□□□□ -1.41
TTC3-210ENST00000450533 LCE3EQ5T5B0 92 aa6.14□□□□□ -1.43
TTC3-210ENST00000450533 SPRR2DP22532 72 aa6.1□□□□□ -1.43
TTC3-210ENST00000450533 KRTAP9-4Q9BYQ2 154 aa6.07□□□□□ -1.44
TTC3-210ENST00000450533 OBSCNQ5VST9 7968 aa6□□□□□ -1.45
TTC3-210ENST00000450533 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
TTC3-210ENST00000450533 KRTAP6-3Q3LI67 103 aa5.9□□□□□ -1.46
TTC3-210ENST00000450533 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.47
TTC3-210ENST00000450533 KRTAP6-2Q3LI66 62 aa5.9□□□□□ -1.47
TTC3-210ENST00000450533 PRM1P04553 51 aa5.88□□□□□ -1.47
TTC3-210ENST00000450533 MT3P25713 68 aa5.79□□□□□ -1.48
TTC3-210ENST00000450533 NEBP20929 6669 aa5.58□□□□□ -1.52
TTC3-210ENST00000450533 KRTAP9-6A0A140TA67 174 aa5.58□□□□□ -1.52
TTC3-210ENST00000450533 KRTAP5-4Q6L8H1 288 aa5.58□□□□□ -1.52
TTC3-210ENST00000450533 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
TTC3-210ENST00000450533 MT4P47944 62 aa5.44□□□□□ -1.54
TTC3-210ENST00000450533 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
TTC3-210ENST00000450533 HMCN1Q96RW7 5635 aa5.23□□□□□ -1.57
TTC3-210ENST00000450533 LCE4AQ5TA78 99 aa5.22□□□□□ -1.57
TTC3-210ENST00000450533 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
TTC3-210ENST00000450533 KRTAP2-2Q9BYT5 123 aa5.12□□□□□ -1.59
TTC3-210ENST00000450533 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
TTC3-210ENST00000450533 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
TTC3-210ENST00000450533 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
TTC3-210ENST00000450533 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
TTC3-210ENST00000450533 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
TTC3-210ENST00000450533 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
TTC3-210ENST00000450533 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
TTC3-210ENST00000450533 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
TTC3-210ENST00000450533 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
TTC3-210ENST00000450533 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
TTC3-210ENST00000450533 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
TTC3-210ENST00000450533 KRTAP21-2Q3LI59 83 aa4.21□□□□□ -1.73
TTC3-210ENST00000450533 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
TTC3-210ENST00000450533 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
TTC3-210ENST00000450533 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
TTC3-210ENST00000450533 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
TTC3-210ENST00000450533 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
TTC3-210ENST00000450533 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
TTC3-210ENST00000450533 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
TTC3-210ENST00000450533 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
TTC3-210ENST00000450533 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
TTC3-210ENST00000450533 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
TTC3-210ENST00000450533 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
TTC3-210ENST00000450533 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
TTC3-210ENST00000450533 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
TTC3-210ENST00000450533 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
TTC3-210ENST00000450533 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
TTC3-210ENST00000450533 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 86.9 ms