RNA–Protein interactions for RNA: ENST00000449891.5

UBE2F-SCLY-202, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene UBE2F-SCLY, Length 2,902 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-202ENST00000449891 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
UBE2F-SCLY-202ENST00000449891 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
UBE2F-SCLY-202ENST00000449891 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
UBE2F-SCLY-202ENST00000449891 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.66
UBE2F-SCLY-202ENST00000449891 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
UBE2F-SCLY-202ENST00000449891 MUC12Q9UKN1 5478 aa4.61□□□□□ -1.67
UBE2F-SCLY-202ENST00000449891 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
UBE2F-SCLY-202ENST00000449891 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
UBE2F-SCLY-202ENST00000449891 LOC100996750A0A140TA64 210 aa4.51□□□□□ -1.69
UBE2F-SCLY-202ENST00000449891 MT1LQ93083 61 aa4.5□□□□□ -1.69
UBE2F-SCLY-202ENST00000449891 MT1EP04732 61 aa4.48□□□□□ -1.69
UBE2F-SCLY-202ENST00000449891 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
UBE2F-SCLY-202ENST00000449891 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
UBE2F-SCLY-202ENST00000449891 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
UBE2F-SCLY-202ENST00000449891 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
UBE2F-SCLY-202ENST00000449891 MT1GP13640 62 aa4.39□□□□□ -1.71
UBE2F-SCLY-202ENST00000449891 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
UBE2F-SCLY-202ENST00000449891 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
UBE2F-SCLY-202ENST00000449891 MDN1Q9NU22 5596 aa4.36□□□□□ -1.71
UBE2F-SCLY-202ENST00000449891 NEBP20929 6669 aa4.35□□□□□ -1.71
UBE2F-SCLY-202ENST00000449891 SPRR2EP22531 72 aa4.28□□□□□ -1.72
UBE2F-SCLY-202ENST00000449891 SPRR2BP35325 72 aa4.28□□□□□ -1.72
UBE2F-SCLY-202ENST00000449891 SPRR2AP35326 72 aa4.28□□□□□ -1.72
UBE2F-SCLY-202ENST00000449891 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
UBE2F-SCLY-202ENST00000449891 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
UBE2F-SCLY-202ENST00000449891 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
UBE2F-SCLY-202ENST00000449891 MT1MQ8N339 61 aa4.19□□□□□ -1.74
UBE2F-SCLY-202ENST00000449891 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.74
UBE2F-SCLY-202ENST00000449891 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
UBE2F-SCLY-202ENST00000449891 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
UBE2F-SCLY-202ENST00000449891 SPRR2DP22532 72 aa4.14□□□□□ -1.75
UBE2F-SCLY-202ENST00000449891 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
UBE2F-SCLY-202ENST00000449891 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
UBE2F-SCLY-202ENST00000449891 KRTAP2-2Q9BYT5 123 aa4.02□□□□□ -1.77
UBE2F-SCLY-202ENST00000449891 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
UBE2F-SCLY-202ENST00000449891 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
UBE2F-SCLY-202ENST00000449891 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
UBE2F-SCLY-202ENST00000449891 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
UBE2F-SCLY-202ENST00000449891 PRM1P04553 51 aa3.75□□□□□ -1.81
UBE2F-SCLY-202ENST00000449891 MT1AP04731 61 aa3.7□□□□□ -1.82
UBE2F-SCLY-202ENST00000449891 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
UBE2F-SCLY-202ENST00000449891 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
UBE2F-SCLY-202ENST00000449891 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
UBE2F-SCLY-202ENST00000449891 LCE4AQ5TA78 99 aa3.65□□□□□ -1.82
UBE2F-SCLY-202ENST00000449891 MT4P47944 62 aa3.62□□□□□ -1.83
UBE2F-SCLY-202ENST00000449891 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
UBE2F-SCLY-202ENST00000449891 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
UBE2F-SCLY-202ENST00000449891 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
UBE2F-SCLY-202ENST00000449891 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
UBE2F-SCLY-202ENST00000449891 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
UBE2F-SCLY-202ENST00000449891 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
UBE2F-SCLY-202ENST00000449891 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
UBE2F-SCLY-202ENST00000449891 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
UBE2F-SCLY-202ENST00000449891 MT3P25713 68 aa3.34□□□□□ -1.87
UBE2F-SCLY-202ENST00000449891 AHNAK2Q8IVF2 5795 aa3.33□□□□□ -1.88
UBE2F-SCLY-202ENST00000449891 KRTAP5-3Q6L8H2 238 aa3.27□□□□□ -1.89
UBE2F-SCLY-202ENST00000449891 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
UBE2F-SCLY-202ENST00000449891 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
UBE2F-SCLY-202ENST00000449891 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
UBE2F-SCLY-202ENST00000449891 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
UBE2F-SCLY-202ENST00000449891 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
UBE2F-SCLY-202ENST00000449891 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
UBE2F-SCLY-202ENST00000449891 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
UBE2F-SCLY-202ENST00000449891 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
UBE2F-SCLY-202ENST00000449891 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
UBE2F-SCLY-202ENST00000449891 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
UBE2F-SCLY-202ENST00000449891 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
UBE2F-SCLY-202ENST00000449891 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
UBE2F-SCLY-202ENST00000449891 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
UBE2F-SCLY-202ENST00000449891 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
UBE2F-SCLY-202ENST00000449891 LCE1CQ5T751 118 aa2.56□□□□□ -2
UBE2F-SCLY-202ENST00000449891 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
UBE2F-SCLY-202ENST00000449891 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
UBE2F-SCLY-202ENST00000449891 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
UBE2F-SCLY-202ENST00000449891 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
UBE2F-SCLY-202ENST00000449891 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
UBE2F-SCLY-202ENST00000449891 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
UBE2F-SCLY-202ENST00000449891 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 68.2 ms