RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 MACF1Q9UPN3 7388 aaKnown RBP7.47□□□□□ -1.21
NPAS1-202ENST00000449844 SPRR2FQ96RM1 72 aa7.45□□□□□ -1.22
NPAS1-202ENST00000449844 KRTAP19-3Q7Z4W3 81 aa7.38□□□□□ -1.23
NPAS1-202ENST00000449844 MUC12Q9UKN1 5478 aa7.32□□□□□ -1.24
NPAS1-202ENST00000449844 MT1GP13640 62 aa7.32□□□□□ -1.24
NPAS1-202ENST00000449844 INE1O15225 51 aa7.3□□□□□ -1.24
NPAS1-202ENST00000449844 MT1MQ8N339 61 aa7.26□□□□□ -1.25
NPAS1-202ENST00000449844 KRTAP9-6A0A140TA67 174 aa7.23□□□□□ -1.25
NPAS1-202ENST00000449844 KRTAP5-9P26371 169 aa7.23□□□□□ -1.25
NPAS1-202ENST00000449844 KRTAP2-3P0C7H8 128 aa7.22□□□□□ -1.25
NPAS1-202ENST00000449844 KRTAP2-4Q9BYR9 128 aa7.22□□□□□ -1.25
NPAS1-202ENST00000449844 KRTAP2-1Q9BYU5 128 aa7.22□□□□□ -1.25
NPAS1-202ENST00000449844 LCE5AQ5TCM9 118 aa7.21□□□□□ -1.26
NPAS1-202ENST00000449844 SYNE2Q8WXH0 6885 aaKnown RBP7.2□□□□□ -1.26
NPAS1-202ENST00000449844 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
NPAS1-202ENST00000449844 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
NPAS1-202ENST00000449844 LCE1AQ5T7P2 110 aa7.06□□□□□ -1.28
NPAS1-202ENST00000449844 SPRR2EP22531 72 aa7.01□□□□□ -1.29
NPAS1-202ENST00000449844 SPRR2BP35325 72 aa7.01□□□□□ -1.29
NPAS1-202ENST00000449844 SPRR2AP35326 72 aa7.01□□□□□ -1.29
NPAS1-202ENST00000449844 KRTAP6-3Q3LI67 103 aa7.01□□□□□ -1.29
NPAS1-202ENST00000449844 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
NPAS1-202ENST00000449844 MDN1Q9NU22 5596 aa6.92□□□□□ -1.3
NPAS1-202ENST00000449844 DSTQ03001 7570 aaKnown RBP6.78□□□□□ -1.32
NPAS1-202ENST00000449844 SPRR2DP22532 72 aa6.75□□□□□ -1.33
NPAS1-202ENST00000449844 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
NPAS1-202ENST00000449844 KRTAP5-5Q701N2 237 aaPredicted RBP6.5□□□□□ -1.37
NPAS1-202ENST00000449844 MT1AP04731 61 aa6.47□□□□□ -1.37
NPAS1-202ENST00000449844 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
NPAS1-202ENST00000449844 NEBP20929 6669 aa6.44□□□□□ -1.38
NPAS1-202ENST00000449844 KRTAP6-1Q3LI64 71 aa6.43□□□□□ -1.38
NPAS1-202ENST00000449844 KRTAP12-4P60329 112 aa6.24□□□□□ -1.41
NPAS1-202ENST00000449844 SYNE1Q8NF91 8797 aaKnown RBP6.16□□□□□ -1.42
NPAS1-202ENST00000449844 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
NPAS1-202ENST00000449844 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
NPAS1-202ENST00000449844 KRTAP5-4Q6L8H1 288 aa6.09□□□□□ -1.43
NPAS1-202ENST00000449844 LCE3DQ9BYE3 92 aa6.03□□□□□ -1.44
NPAS1-202ENST00000449844 KRTAP2-2Q9BYT5 123 aa5.98□□□□□ -1.45
NPAS1-202ENST00000449844 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
NPAS1-202ENST00000449844 KRTAP20-1Q3LI63 56 aa5.94□□□□□ -1.46
NPAS1-202ENST00000449844 LCE3EQ5T5B0 92 aa5.94□□□□□ -1.46
NPAS1-202ENST00000449844 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
NPAS1-202ENST00000449844 MT4P47944 62 aa5.87□□□□□ -1.47
NPAS1-202ENST00000449844 MT3P25713 68 aa5.84□□□□□ -1.48
NPAS1-202ENST00000449844 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
NPAS1-202ENST00000449844 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
NPAS1-202ENST00000449844 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
NPAS1-202ENST00000449844 KRTAP5-2Q701N4 177 aa5.57□□□□□ -1.52
NPAS1-202ENST00000449844 HMCN1Q96RW7 5635 aa5.57□□□□□ -1.52
NPAS1-202ENST00000449844 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
NPAS1-202ENST00000449844 PRM1P04553 51 aa5.47□□□□□ -1.53
NPAS1-202ENST00000449844 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
NPAS1-202ENST00000449844 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
NPAS1-202ENST00000449844 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
NPAS1-202ENST00000449844 AHNAK2Q8IVF2 5795 aa4.83□□□□□ -1.64
NPAS1-202ENST00000449844 KRTAP5-1Q6L8H4 278 aa4.79□□□□□ -1.64
NPAS1-202ENST00000449844 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
NPAS1-202ENST00000449844 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
NPAS1-202ENST00000449844 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
NPAS1-202ENST00000449844 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
NPAS1-202ENST00000449844 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
NPAS1-202ENST00000449844 LCE1CQ5T751 118 aa4.65□□□□□ -1.66
NPAS1-202ENST00000449844 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
NPAS1-202ENST00000449844 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
NPAS1-202ENST00000449844 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
NPAS1-202ENST00000449844 KRTAP21-2Q3LI59 83 aa4.19□□□□□ -1.74
NPAS1-202ENST00000449844 GPR98Q8WXG9 6306 aa4.16□□□□□ -1.74
NPAS1-202ENST00000449844 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
NPAS1-202ENST00000449844 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
NPAS1-202ENST00000449844 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
NPAS1-202ENST00000449844 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
NPAS1-202ENST00000449844 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
NPAS1-202ENST00000449844 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
NPAS1-202ENST00000449844 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
NPAS1-202ENST00000449844 KRTAP21-1Q3LI58 79 aa3.45□□□□□ -1.86
NPAS1-202ENST00000449844 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
NPAS1-202ENST00000449844 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms