RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
SMARCD2-203ENST00000448276 FCGBPQ9Y6R7 5405 aaPredicted RBP6.7□□□□□ -1.34
SMARCD2-203ENST00000448276 MT1GP13640 62 aa6.63□□□□□ -1.35
SMARCD2-203ENST00000448276 CRCT1Q9UGL9 99 aa6.61□□□□□ -1.35
SMARCD2-203ENST00000448276 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.35
SMARCD2-203ENST00000448276 LCE2DQ5TA82 110 aaPredicted RBP6.58□□□□□ -1.36
SMARCD2-203ENST00000448276 MUC12Q9UKN1 5478 aa6.56□□□□□ -1.36
SMARCD2-203ENST00000448276 KRTAP12-4P60329 112 aa6.53□□□□□ -1.36
SMARCD2-203ENST00000448276 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
SMARCD2-203ENST00000448276 MACF1Q9UPN3 7388 aaKnown RBP6.48□□□□□ -1.37
SMARCD2-203ENST00000448276 DSTQ03001 7570 aaKnown RBP6.44□□□□□ -1.38
SMARCD2-203ENST00000448276 SYNE2Q8WXH0 6885 aaKnown RBP6.4□□□□□ -1.38
SMARCD2-203ENST00000448276 MT1MQ8N339 61 aa6.38□□□□□ -1.39
SMARCD2-203ENST00000448276 KRTAP19-3Q7Z4W3 81 aa6.29□□□□□ -1.4
SMARCD2-203ENST00000448276 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
SMARCD2-203ENST00000448276 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
SMARCD2-203ENST00000448276 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
SMARCD2-203ENST00000448276 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.42
SMARCD2-203ENST00000448276 MDN1Q9NU22 5596 aa6.12□□□□□ -1.43
SMARCD2-203ENST00000448276 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
SMARCD2-203ENST00000448276 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.46
SMARCD2-203ENST00000448276 KRTAP9-7A8MTY7 169 aa5.94□□□□□ -1.46
SMARCD2-203ENST00000448276 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
SMARCD2-203ENST00000448276 MT1AP04731 61 aa5.88□□□□□ -1.47
SMARCD2-203ENST00000448276 LCE3DQ9BYE3 92 aa5.88□□□□□ -1.47
SMARCD2-203ENST00000448276 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
SMARCD2-203ENST00000448276 PRM1P04553 51 aa5.84□□□□□ -1.47
SMARCD2-203ENST00000448276 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
SMARCD2-203ENST00000448276 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
SMARCD2-203ENST00000448276 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.81□□□□□ -1.48
SMARCD2-203ENST00000448276 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
SMARCD2-203ENST00000448276 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
SMARCD2-203ENST00000448276 SPRR2EP22531 72 aa5.69□□□□□ -1.5
SMARCD2-203ENST00000448276 SPRR2BP35325 72 aa5.69□□□□□ -1.5
SMARCD2-203ENST00000448276 SPRR2AP35326 72 aa5.69□□□□□ -1.5
SMARCD2-203ENST00000448276 KRTAP6-2Q3LI66 62 aa5.54□□□□□ -1.52
SMARCD2-203ENST00000448276 KRTAP6-3Q3LI67 103 aa5.53□□□□□ -1.52
SMARCD2-203ENST00000448276 SPRR2DP22532 72 aa5.44□□□□□ -1.54
SMARCD2-203ENST00000448276 NEBP20929 6669 aa5.41□□□□□ -1.54
SMARCD2-203ENST00000448276 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
SMARCD2-203ENST00000448276 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
SMARCD2-203ENST00000448276 MT3P25713 68 aa5.11□□□□□ -1.59
SMARCD2-203ENST00000448276 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
SMARCD2-203ENST00000448276 MT4P47944 62 aa4.86□□□□□ -1.63
SMARCD2-203ENST00000448276 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
SMARCD2-203ENST00000448276 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
SMARCD2-203ENST00000448276 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
SMARCD2-203ENST00000448276 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
SMARCD2-203ENST00000448276 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
SMARCD2-203ENST00000448276 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
SMARCD2-203ENST00000448276 LCE1EQ5T753 118 aa4.59□□□□□ -1.68
SMARCD2-203ENST00000448276 MUC5ACP98088 5654 aa4.54□□□□□ -1.68
SMARCD2-203ENST00000448276 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
SMARCD2-203ENST00000448276 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
SMARCD2-203ENST00000448276 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
SMARCD2-203ENST00000448276 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
SMARCD2-203ENST00000448276 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
SMARCD2-203ENST00000448276 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.76
SMARCD2-203ENST00000448276 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
SMARCD2-203ENST00000448276 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
SMARCD2-203ENST00000448276 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
SMARCD2-203ENST00000448276 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
SMARCD2-203ENST00000448276 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
SMARCD2-203ENST00000448276 KRTAP21-2Q3LI59 83 aa3.77□□□□□ -1.81
SMARCD2-203ENST00000448276 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
SMARCD2-203ENST00000448276 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
SMARCD2-203ENST00000448276 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
SMARCD2-203ENST00000448276 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
SMARCD2-203ENST00000448276 KRTAP21-1Q3LI58 79 aa3.61□□□□□ -1.83
SMARCD2-203ENST00000448276 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
SMARCD2-203ENST00000448276 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
SMARCD2-203ENST00000448276 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
SMARCD2-203ENST00000448276 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
SMARCD2-203ENST00000448276 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
SMARCD2-203ENST00000448276 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
SMARCD2-203ENST00000448276 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
SMARCD2-203ENST00000448276 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms