RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

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Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
PBX3-207ENST00000447726 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
PBX3-207ENST00000447726 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
PBX3-207ENST00000447726 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
PBX3-207ENST00000447726 MT1GP13640 62 aa5.31□□□□□ -1.56
PBX3-207ENST00000447726 LCE2DQ5TA82 110 aaPredicted RBP5.31□□□□□ -1.56
PBX3-207ENST00000447726 MT1MQ8N339 61 aa5.23□□□□□ -1.57
PBX3-207ENST00000447726 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.57
PBX3-207ENST00000447726 KRTAP19-3Q7Z4W3 81 aa5.21□□□□□ -1.58
PBX3-207ENST00000447726 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
PBX3-207ENST00000447726 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
PBX3-207ENST00000447726 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
PBX3-207ENST00000447726 SPRR2FQ96RM1 72 aa4.99□□□□□ -1.61
PBX3-207ENST00000447726 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
PBX3-207ENST00000447726 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
PBX3-207ENST00000447726 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
PBX3-207ENST00000447726 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
PBX3-207ENST00000447726 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
PBX3-207ENST00000447726 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
PBX3-207ENST00000447726 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
PBX3-207ENST00000447726 MT1AP04731 61 aa4.73□□□□□ -1.65
PBX3-207ENST00000447726 KRTAP9-2Q9BYQ4 174 aa4.66□□□□□ -1.66
PBX3-207ENST00000447726 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.67
PBX3-207ENST00000447726 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
PBX3-207ENST00000447726 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
PBX3-207ENST00000447726 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
PBX3-207ENST00000447726 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
PBX3-207ENST00000447726 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
PBX3-207ENST00000447726 SPRR2EP22531 72 aa4.48□□□□□ -1.69
PBX3-207ENST00000447726 SPRR2BP35325 72 aa4.48□□□□□ -1.69
PBX3-207ENST00000447726 SPRR2AP35326 72 aa4.48□□□□□ -1.69
PBX3-207ENST00000447726 PRM1P04553 51 aa4.48□□□□□ -1.69
PBX3-207ENST00000447726 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.69
PBX3-207ENST00000447726 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
PBX3-207ENST00000447726 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
PBX3-207ENST00000447726 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
PBX3-207ENST00000447726 SPRR2DP22532 72 aa4.27□□□□□ -1.73
PBX3-207ENST00000447726 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
PBX3-207ENST00000447726 MT3P25713 68 aa4.2□□□□□ -1.74
PBX3-207ENST00000447726 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
PBX3-207ENST00000447726 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.13□□□□□ -1.75
PBX3-207ENST00000447726 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
PBX3-207ENST00000447726 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
PBX3-207ENST00000447726 MT4P47944 62 aa3.83□□□□□ -1.8
PBX3-207ENST00000447726 NEBP20929 6669 aa3.81□□□□□ -1.8
PBX3-207ENST00000447726 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
PBX3-207ENST00000447726 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
PBX3-207ENST00000447726 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
PBX3-207ENST00000447726 MUC5ACP98088 5654 aa3.65□□□□□ -1.82
PBX3-207ENST00000447726 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
PBX3-207ENST00000447726 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
PBX3-207ENST00000447726 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
PBX3-207ENST00000447726 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
PBX3-207ENST00000447726 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
PBX3-207ENST00000447726 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
PBX3-207ENST00000447726 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
PBX3-207ENST00000447726 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
PBX3-207ENST00000447726 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
PBX3-207ENST00000447726 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
PBX3-207ENST00000447726 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
PBX3-207ENST00000447726 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
PBX3-207ENST00000447726 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
PBX3-207ENST00000447726 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
PBX3-207ENST00000447726 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
PBX3-207ENST00000447726 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
PBX3-207ENST00000447726 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
PBX3-207ENST00000447726 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
PBX3-207ENST00000447726 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
PBX3-207ENST00000447726 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
PBX3-207ENST00000447726 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
PBX3-207ENST00000447726 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
PBX3-207ENST00000447726 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
PBX3-207ENST00000447726 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
PBX3-207ENST00000447726 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
PBX3-207ENST00000447726 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
PBX3-207ENST00000447726 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
PBX3-207ENST00000447726 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 72 ms