RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
FAM3A-215ENST00000447601 MACF1Q9UPN3 7388 aaKnown RBP6.68□□□□□ -1.34
FAM3A-215ENST00000447601 KRTAP9-6A8MVA2 160 aa6.66□□□□□ -1.34
FAM3A-215ENST00000447601 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
FAM3A-215ENST00000447601 MT1GP13640 62 aa6.59□□□□□ -1.35
FAM3A-215ENST00000447601 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
FAM3A-215ENST00000447601 SPRR2FQ96RM1 72 aa6.57□□□□□ -1.36
FAM3A-215ENST00000447601 MUC12Q9UKN1 5478 aa6.53□□□□□ -1.36
FAM3A-215ENST00000447601 MT1MQ8N339 61 aa6.53□□□□□ -1.36
FAM3A-215ENST00000447601 SYNE2Q8WXH0 6885 aaKnown RBP6.51□□□□□ -1.37
FAM3A-215ENST00000447601 LCE5AQ5TCM9 118 aa6.45□□□□□ -1.38
FAM3A-215ENST00000447601 KRTAP6-3Q3LI67 103 aa6.44□□□□□ -1.38
FAM3A-215ENST00000447601 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
FAM3A-215ENST00000447601 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
FAM3A-215ENST00000447601 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
FAM3A-215ENST00000447601 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
FAM3A-215ENST00000447601 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
FAM3A-215ENST00000447601 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
FAM3A-215ENST00000447601 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
FAM3A-215ENST00000447601 INE1O15225 51 aa6.21□□□□□ -1.42
FAM3A-215ENST00000447601 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
FAM3A-215ENST00000447601 SPRR2EP22531 72 aa6.13□□□□□ -1.43
FAM3A-215ENST00000447601 SPRR2BP35325 72 aa6.13□□□□□ -1.43
FAM3A-215ENST00000447601 SPRR2AP35326 72 aa6.13□□□□□ -1.43
FAM3A-215ENST00000447601 NEBP20929 6669 aa6.08□□□□□ -1.44
FAM3A-215ENST00000447601 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
FAM3A-215ENST00000447601 SPRR2DP22532 72 aa5.9□□□□□ -1.47
FAM3A-215ENST00000447601 MT1AP04731 61 aa5.84□□□□□ -1.47
FAM3A-215ENST00000447601 KRTAP5-5Q701N2 237 aaPredicted RBP5.84□□□□□ -1.47
FAM3A-215ENST00000447601 KRTAP20-1Q3LI63 56 aa5.81□□□□□ -1.48
FAM3A-215ENST00000447601 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
FAM3A-215ENST00000447601 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
FAM3A-215ENST00000447601 KRTAP2-2Q9BYT5 123 aa5.6□□□□□ -1.51
FAM3A-215ENST00000447601 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
FAM3A-215ENST00000447601 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
FAM3A-215ENST00000447601 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
FAM3A-215ENST00000447601 KRTAP12-4P60329 112 aa5.46□□□□□ -1.53
FAM3A-215ENST00000447601 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
FAM3A-215ENST00000447601 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
FAM3A-215ENST00000447601 MT3P25713 68 aa5.29□□□□□ -1.56
FAM3A-215ENST00000447601 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
FAM3A-215ENST00000447601 LCE3EQ5T5B0 92 aa5.25□□□□□ -1.57
FAM3A-215ENST00000447601 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
FAM3A-215ENST00000447601 MT4P47944 62 aa5.11□□□□□ -1.59
FAM3A-215ENST00000447601 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
FAM3A-215ENST00000447601 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
FAM3A-215ENST00000447601 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
FAM3A-215ENST00000447601 KRTAP5-2Q701N4 177 aa4.96□□□□□ -1.62
FAM3A-215ENST00000447601 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
FAM3A-215ENST00000447601 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
FAM3A-215ENST00000447601 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
FAM3A-215ENST00000447601 PRM1P04553 51 aa4.76□□□□□ -1.65
FAM3A-215ENST00000447601 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
FAM3A-215ENST00000447601 GPR98Q8WXG9 6306 aa4.62□□□□□ -1.67
FAM3A-215ENST00000447601 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
FAM3A-215ENST00000447601 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
FAM3A-215ENST00000447601 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
FAM3A-215ENST00000447601 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
FAM3A-215ENST00000447601 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
FAM3A-215ENST00000447601 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
FAM3A-215ENST00000447601 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
FAM3A-215ENST00000447601 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
FAM3A-215ENST00000447601 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
FAM3A-215ENST00000447601 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
FAM3A-215ENST00000447601 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
FAM3A-215ENST00000447601 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
FAM3A-215ENST00000447601 KRTAP21-2Q3LI59 83 aa3.77□□□□□ -1.81
FAM3A-215ENST00000447601 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
FAM3A-215ENST00000447601 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
FAM3A-215ENST00000447601 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.82
FAM3A-215ENST00000447601 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
FAM3A-215ENST00000447601 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
FAM3A-215ENST00000447601 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
FAM3A-215ENST00000447601 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
FAM3A-215ENST00000447601 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
FAM3A-215ENST00000447601 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
FAM3A-215ENST00000447601 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 100.3 ms