RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
ZNF550-204ENST00000447310 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
ZNF550-204ENST00000447310 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
ZNF550-204ENST00000447310 KMT2DO14686 5537 aa3.66□□□□□ -1.82
ZNF550-204ENST00000447310 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
ZNF550-204ENST00000447310 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
ZNF550-204ENST00000447310 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
ZNF550-204ENST00000447310 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
ZNF550-204ENST00000447310 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
ZNF550-204ENST00000447310 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
ZNF550-204ENST00000447310 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
ZNF550-204ENST00000447310 LCE2DQ5TA82 110 aaPredicted RBP3.56□□□□□ -1.84
ZNF550-204ENST00000447310 SPRR2EP22531 72 aa3.51□□□□□ -1.85
ZNF550-204ENST00000447310 SPRR2BP35325 72 aa3.51□□□□□ -1.85
ZNF550-204ENST00000447310 SPRR2AP35326 72 aa3.51□□□□□ -1.85
ZNF550-204ENST00000447310 MT1MQ8N339 61 aa3.51□□□□□ -1.85
ZNF550-204ENST00000447310 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
ZNF550-204ENST00000447310 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
ZNF550-204ENST00000447310 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
ZNF550-204ENST00000447310 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
ZNF550-204ENST00000447310 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.87
ZNF550-204ENST00000447310 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
ZNF550-204ENST00000447310 SPRR2DP22532 72 aa3.36□□□□□ -1.87
ZNF550-204ENST00000447310 KRTAP9-2Q9BYQ4 174 aa3.33□□□□□ -1.88
ZNF550-204ENST00000447310 PRM1P04553 51 aa3.31□□□□□ -1.88
ZNF550-204ENST00000447310 SSPOA2VEC9 5147 aa3.26□□□□□ -1.89
ZNF550-204ENST00000447310 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
ZNF550-204ENST00000447310 MT1AP04731 61 aa3.2□□□□□ -1.9
ZNF550-204ENST00000447310 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
ZNF550-204ENST00000447310 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
ZNF550-204ENST00000447310 MT3P25713 68 aa3.12□□□□□ -1.91
ZNF550-204ENST00000447310 MT4P47944 62 aa3.12□□□□□ -1.91
ZNF550-204ENST00000447310 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
ZNF550-204ENST00000447310 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
ZNF550-204ENST00000447310 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
ZNF550-204ENST00000447310 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
ZNF550-204ENST00000447310 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
ZNF550-204ENST00000447310 KRTAP9-6A0A140TA67 174 aa2.98□□□□□ -1.93
ZNF550-204ENST00000447310 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
ZNF550-204ENST00000447310 LCE1DQ5T752 114 aa2.91□□□□□ -1.94
ZNF550-204ENST00000447310 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.9□□□□□ -1.95
ZNF550-204ENST00000447310 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
ZNF550-204ENST00000447310 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
ZNF550-204ENST00000447310 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
ZNF550-204ENST00000447310 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
ZNF550-204ENST00000447310 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
ZNF550-204ENST00000447310 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
ZNF550-204ENST00000447310 NEBP20929 6669 aa2.67□□□□□ -1.98
ZNF550-204ENST00000447310 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.98
ZNF550-204ENST00000447310 LCE4AQ5TA78 99 aa2.56□□□□□ -2
ZNF550-204ENST00000447310 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
ZNF550-204ENST00000447310 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
ZNF550-204ENST00000447310 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
ZNF550-204ENST00000447310 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
ZNF550-204ENST00000447310 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
ZNF550-204ENST00000447310 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
ZNF550-204ENST00000447310 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
ZNF550-204ENST00000447310 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
ZNF550-204ENST00000447310 LCE1EQ5T753 118 aa2.34□□□□□ -2.04
ZNF550-204ENST00000447310 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
ZNF550-204ENST00000447310 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
ZNF550-204ENST00000447310 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
ZNF550-204ENST00000447310 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.05
ZNF550-204ENST00000447310 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
ZNF550-204ENST00000447310 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
ZNF550-204ENST00000447310 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
ZNF550-204ENST00000447310 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
ZNF550-204ENST00000447310 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
ZNF550-204ENST00000447310 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
ZNF550-204ENST00000447310 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
ZNF550-204ENST00000447310 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
ZNF550-204ENST00000447310 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
ZNF550-204ENST00000447310 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
ZNF550-204ENST00000447310 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
ZNF550-204ENST00000447310 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
ZNF550-204ENST00000447310 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
ZNF550-204ENST00000447310 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
ZNF550-204ENST00000447310 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 339.3 ms