RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 ATP5EP56381 51 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-206ENST00000447024 PLAC4Q8WY50 150 aa3.3□□□□□ -1.88
SMARCE1-206ENST00000447024 P0C880 135 aa3.29□□□□□ -1.88
SMARCE1-206ENST00000447024 CHKB-CPT1BH3BT56 60 aa3.28□□□□□ -1.88
SMARCE1-206ENST00000447024 M0QZ58 72 aa3.27□□□□□ -1.89
SMARCE1-206ENST00000447024 PRO0628Q9UI54 55 aa3.27□□□□□ -1.89
SMARCE1-206ENST00000447024 COA5Q86WW8 74 aa3.26□□□□□ -1.89
SMARCE1-206ENST00000447024 SERP1Q9Y6X1 66 aa3.26□□□□□ -1.89
SMARCE1-206ENST00000447024 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-206ENST00000447024 MT1XP80297 61 aa3.22□□□□□ -1.89
SMARCE1-206ENST00000447024 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
SMARCE1-206ENST00000447024 LINC01554Q52M75 96 aa3.19□□□□□ -1.9
SMARCE1-206ENST00000447024 KMT2DO14686 5537 aa3.18□□□□□ -1.9
SMARCE1-206ENST00000447024 MDN1Q9NU22 5596 aa3.15□□□□□ -1.91
SMARCE1-206ENST00000447024 NEBP20929 6669 aa3.14□□□□□ -1.91
SMARCE1-206ENST00000447024 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
SMARCE1-206ENST00000447024 LINC01558Q9Y6Z2 57 aa3.12□□□□□ -1.91
SMARCE1-206ENST00000447024 Q1T7F1 81 aa3.11□□□□□ -1.91
SMARCE1-206ENST00000447024 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
SMARCE1-206ENST00000447024 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
SMARCE1-206ENST00000447024 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
SMARCE1-206ENST00000447024 A0A1B0GU33 70 aa3.06□□□□□ -1.92
SMARCE1-206ENST00000447024 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
SMARCE1-206ENST00000447024 PRR15LQ9BU68 103 aa3.06□□□□□ -1.92
SMARCE1-206ENST00000447024 A0A1B0GU69 56 aa3.05□□□□□ -1.92
SMARCE1-206ENST00000447024 SPRR2EP22531 72 aa3.05□□□□□ -1.92
SMARCE1-206ENST00000447024 SPRR2BP35325 72 aa3.05□□□□□ -1.92
SMARCE1-206ENST00000447024 SPRR2AP35326 72 aa3.05□□□□□ -1.92
SMARCE1-206ENST00000447024 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
SMARCE1-206ENST00000447024 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
SMARCE1-206ENST00000447024 PMAIP1Q13794 54 aa3.01□□□□□ -1.93
SMARCE1-206ENST00000447024 K7ERS5 55 aa3□□□□□ -1.93
SMARCE1-206ENST00000447024 A0A0D9SG42 100 aa2.99□□□□□ -1.93
SMARCE1-206ENST00000447024 SPATA8Q6RVD6 105 aa2.98□□□□□ -1.93
SMARCE1-206ENST00000447024 KRTAP12-1P59990 96 aa2.96□□□□□ -1.94
SMARCE1-206ENST00000447024 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
SMARCE1-206ENST00000447024 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
SMARCE1-206ENST00000447024 A6NED7 52 aa2.94□□□□□ -1.94
SMARCE1-206ENST00000447024 UQCR11O14957 56 aa2.94□□□□□ -1.94
SMARCE1-206ENST00000447024 SPRR2DP22532 72 aa2.94□□□□□ -1.94
SMARCE1-206ENST00000447024 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
SMARCE1-206ENST00000447024 MIR22HGQ0VDD5 57 aa2.92□□□□□ -1.94
SMARCE1-206ENST00000447024 CDC42SE1Q9NRR8 79 aa2.91□□□□□ -1.94
SMARCE1-206ENST00000447024 BRK1Q8WUW1 75 aa2.89□□□□□ -1.95
SMARCE1-206ENST00000447024 KRTAP19-7Q3SYF9 63 aa2.88□□□□□ -1.95
SMARCE1-206ENST00000447024 MT1EP04732 61 aa2.86□□□□□ -1.95
SMARCE1-206ENST00000447024 TNP1P09430 55 aa2.86□□□□□ -1.95
SMARCE1-206ENST00000447024 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
SMARCE1-206ENST00000447024 MT1GP13640 62 aa2.81□□□□□ -1.96
SMARCE1-206ENST00000447024 C10orf95Q9H7T3 257 aa2.81□□□□□ -1.96
SMARCE1-206ENST00000447024 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
SMARCE1-206ENST00000447024 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
SMARCE1-206ENST00000447024 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
SMARCE1-206ENST00000447024 MT1LQ93083 61 aa2.74□□□□□ -1.97
SMARCE1-206ENST00000447024 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
SMARCE1-206ENST00000447024 MT1MQ8N339 61 aa2.71□□□□□ -1.98
SMARCE1-206ENST00000447024 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
SMARCE1-206ENST00000447024 KTN1-AS1Q86SY8 53 aa2.69□□□□□ -1.98
SMARCE1-206ENST00000447024 ROMO1P60602 79 aa2.68□□□□□ -1.98
SMARCE1-206ENST00000447024 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
SMARCE1-206ENST00000447024 HMCN1Q96RW7 5635 aa2.59□□□□□ -2
SMARCE1-206ENST00000447024 MT4P47944 62 aa2.53□□□□□ -2
SMARCE1-206ENST00000447024 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
SMARCE1-206ENST00000447024 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
SMARCE1-206ENST00000447024 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
SMARCE1-206ENST00000447024 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
SMARCE1-206ENST00000447024 MT1AP04731 61 aa2.35□□□□□ -2.03
SMARCE1-206ENST00000447024 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
SMARCE1-206ENST00000447024 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
SMARCE1-206ENST00000447024 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
SMARCE1-206ENST00000447024 INE1O15225 51 aa2.08□□□□□ -2.08
SMARCE1-206ENST00000447024 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
SMARCE1-206ENST00000447024 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
SMARCE1-206ENST00000447024 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
SMARCE1-206ENST00000447024 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
SMARCE1-206ENST00000447024 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
SMARCE1-206ENST00000447024 PRM1P04553 51 aa1.4□□□□□ -2.19
SMARCE1-206ENST00000447024 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 293.9 ms