RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 MT1LQ93083 61 aa3.35□□□□□ -1.87
COL6A4P1-201ENST00000446690 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.34□□□□□ -1.87
COL6A4P1-201ENST00000446690 CRCT1Q9UGL9 99 aa3.33□□□□□ -1.88
COL6A4P1-201ENST00000446690 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
COL6A4P1-201ENST00000446690 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
COL6A4P1-201ENST00000446690 SPRR2FQ96RM1 72 aa3.26□□□□□ -1.89
COL6A4P1-201ENST00000446690 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
COL6A4P1-201ENST00000446690 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
COL6A4P1-201ENST00000446690 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
COL6A4P1-201ENST00000446690 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
COL6A4P1-201ENST00000446690 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.89
COL6A4P1-201ENST00000446690 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.89
COL6A4P1-201ENST00000446690 MT1GP13640 62 aa3.2□□□□□ -1.9
COL6A4P1-201ENST00000446690 LCE3BQ5TA77 95 aa3.19□□□□□ -1.9
COL6A4P1-201ENST00000446690 MT1MQ8N339 61 aa3.19□□□□□ -1.9
COL6A4P1-201ENST00000446690 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
COL6A4P1-201ENST00000446690 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
COL6A4P1-201ENST00000446690 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
COL6A4P1-201ENST00000446690 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
COL6A4P1-201ENST00000446690 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
COL6A4P1-201ENST00000446690 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
COL6A4P1-201ENST00000446690 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
COL6A4P1-201ENST00000446690 KRTAP2-3P0C7H8 128 aa3.06□□□□□ -1.92
COL6A4P1-201ENST00000446690 KRTAP2-4Q9BYR9 128 aa3.06□□□□□ -1.92
COL6A4P1-201ENST00000446690 KRTAP2-1Q9BYU5 128 aa3.06□□□□□ -1.92
COL6A4P1-201ENST00000446690 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
COL6A4P1-201ENST00000446690 SPRR2EP22531 72 aa3.04□□□□□ -1.92
COL6A4P1-201ENST00000446690 SPRR2BP35325 72 aa3.04□□□□□ -1.92
COL6A4P1-201ENST00000446690 SPRR2AP35326 72 aa3.04□□□□□ -1.92
COL6A4P1-201ENST00000446690 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
COL6A4P1-201ENST00000446690 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
COL6A4P1-201ENST00000446690 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
COL6A4P1-201ENST00000446690 KRTAP4-9Q9BYQ8 210 aa2.94□□□□□ -1.94
COL6A4P1-201ENST00000446690 SPRR2DP22532 72 aa2.92□□□□□ -1.94
COL6A4P1-201ENST00000446690 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
COL6A4P1-201ENST00000446690 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
COL6A4P1-201ENST00000446690 MT1AP04731 61 aa2.82□□□□□ -1.96
COL6A4P1-201ENST00000446690 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
COL6A4P1-201ENST00000446690 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
COL6A4P1-201ENST00000446690 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
COL6A4P1-201ENST00000446690 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
COL6A4P1-201ENST00000446690 NEBP20929 6669 aa2.76□□□□□ -1.97
COL6A4P1-201ENST00000446690 KRTAP12-4P60329 112 aa2.75□□□□□ -1.97
COL6A4P1-201ENST00000446690 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
COL6A4P1-201ENST00000446690 LCE4AQ5TA78 99 aa2.65□□□□□ -1.98
COL6A4P1-201ENST00000446690 MT3P25713 68 aa2.63□□□□□ -1.99
COL6A4P1-201ENST00000446690 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
COL6A4P1-201ENST00000446690 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
COL6A4P1-201ENST00000446690 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
COL6A4P1-201ENST00000446690 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
COL6A4P1-201ENST00000446690 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
COL6A4P1-201ENST00000446690 MT4P47944 62 aa2.58□□□□□ -2
COL6A4P1-201ENST00000446690 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
COL6A4P1-201ENST00000446690 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
COL6A4P1-201ENST00000446690 PRM1P04553 51 aa2.47□□□□□ -2.01
COL6A4P1-201ENST00000446690 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
COL6A4P1-201ENST00000446690 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
COL6A4P1-201ENST00000446690 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
COL6A4P1-201ENST00000446690 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
COL6A4P1-201ENST00000446690 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
COL6A4P1-201ENST00000446690 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
COL6A4P1-201ENST00000446690 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
COL6A4P1-201ENST00000446690 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
COL6A4P1-201ENST00000446690 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
COL6A4P1-201ENST00000446690 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
COL6A4P1-201ENST00000446690 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
COL6A4P1-201ENST00000446690 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
COL6A4P1-201ENST00000446690 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
COL6A4P1-201ENST00000446690 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
COL6A4P1-201ENST00000446690 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
COL6A4P1-201ENST00000446690 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
COL6A4P1-201ENST00000446690 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
COL6A4P1-201ENST00000446690 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
COL6A4P1-201ENST00000446690 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
COL6A4P1-201ENST00000446690 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
COL6A4P1-201ENST00000446690 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
COL6A4P1-201ENST00000446690 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 31.6 ms