RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 LCE2DQ5TA82 110 aaPredicted RBP5.82□□□□□ -1.48
LAPTM4B-201ENST00000445593 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
LAPTM4B-201ENST00000445593 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
LAPTM4B-201ENST00000445593 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
LAPTM4B-201ENST00000445593 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
LAPTM4B-201ENST00000445593 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
LAPTM4B-201ENST00000445593 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
LAPTM4B-201ENST00000445593 MT1GP13640 62 aa5.61□□□□□ -1.51
LAPTM4B-201ENST00000445593 MDN1Q9NU22 5596 aa5.6□□□□□ -1.51
LAPTM4B-201ENST00000445593 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
LAPTM4B-201ENST00000445593 MT1MQ8N339 61 aa5.57□□□□□ -1.52
LAPTM4B-201ENST00000445593 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
LAPTM4B-201ENST00000445593 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
LAPTM4B-201ENST00000445593 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
LAPTM4B-201ENST00000445593 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
LAPTM4B-201ENST00000445593 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
LAPTM4B-201ENST00000445593 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
LAPTM4B-201ENST00000445593 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
LAPTM4B-201ENST00000445593 SPRR2EP22531 72 aa5.24□□□□□ -1.57
LAPTM4B-201ENST00000445593 SPRR2BP35325 72 aa5.24□□□□□ -1.57
LAPTM4B-201ENST00000445593 SPRR2AP35326 72 aa5.24□□□□□ -1.57
LAPTM4B-201ENST00000445593 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
LAPTM4B-201ENST00000445593 KRTAP5-9P26371 169 aa5.16□□□□□ -1.58
LAPTM4B-201ENST00000445593 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
LAPTM4B-201ENST00000445593 LCE3BQ5TA77 95 aa5.15□□□□□ -1.58
LAPTM4B-201ENST00000445593 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
LAPTM4B-201ENST00000445593 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
LAPTM4B-201ENST00000445593 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
LAPTM4B-201ENST00000445593 SPRR2DP22532 72 aa5.01□□□□□ -1.61
LAPTM4B-201ENST00000445593 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
LAPTM4B-201ENST00000445593 MT1AP04731 61 aa4.9□□□□□ -1.63
LAPTM4B-201ENST00000445593 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
LAPTM4B-201ENST00000445593 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
LAPTM4B-201ENST00000445593 NEBP20929 6669 aa4.73□□□□□ -1.65
LAPTM4B-201ENST00000445593 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
LAPTM4B-201ENST00000445593 PRM1P04553 51 aa4.71□□□□□ -1.66
LAPTM4B-201ENST00000445593 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
LAPTM4B-201ENST00000445593 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
LAPTM4B-201ENST00000445593 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
LAPTM4B-201ENST00000445593 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
LAPTM4B-201ENST00000445593 MT4P47944 62 aa4.53□□□□□ -1.68
LAPTM4B-201ENST00000445593 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
LAPTM4B-201ENST00000445593 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
LAPTM4B-201ENST00000445593 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
LAPTM4B-201ENST00000445593 MT3P25713 68 aa4.44□□□□□ -1.7
LAPTM4B-201ENST00000445593 MUC19Q7Z5P9 8384 aa4.42□□□□□ -1.7
LAPTM4B-201ENST00000445593 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
LAPTM4B-201ENST00000445593 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
LAPTM4B-201ENST00000445593 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
LAPTM4B-201ENST00000445593 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
LAPTM4B-201ENST00000445593 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
LAPTM4B-201ENST00000445593 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
LAPTM4B-201ENST00000445593 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
LAPTM4B-201ENST00000445593 LCE1FQ5T754 118 aa4□□□□□ -1.77
LAPTM4B-201ENST00000445593 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
LAPTM4B-201ENST00000445593 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
LAPTM4B-201ENST00000445593 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
LAPTM4B-201ENST00000445593 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
LAPTM4B-201ENST00000445593 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
LAPTM4B-201ENST00000445593 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
LAPTM4B-201ENST00000445593 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
LAPTM4B-201ENST00000445593 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
LAPTM4B-201ENST00000445593 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
LAPTM4B-201ENST00000445593 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
LAPTM4B-201ENST00000445593 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
LAPTM4B-201ENST00000445593 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
LAPTM4B-201ENST00000445593 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
LAPTM4B-201ENST00000445593 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
LAPTM4B-201ENST00000445593 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
LAPTM4B-201ENST00000445593 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
LAPTM4B-201ENST00000445593 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
LAPTM4B-201ENST00000445593 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
LAPTM4B-201ENST00000445593 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
LAPTM4B-201ENST00000445593 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
LAPTM4B-201ENST00000445593 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
LAPTM4B-201ENST00000445593 PHGR1C9JFL3 82 aa2.58□□□□□ -2
LAPTM4B-201ENST00000445593 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 102 ms