RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
TRO-215ENST00000445561 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
TRO-215ENST00000445561 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
TRO-215ENST00000445561 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
TRO-215ENST00000445561 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
TRO-215ENST00000445561 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
TRO-215ENST00000445561 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
TRO-215ENST00000445561 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
TRO-215ENST00000445561 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
TRO-215ENST00000445561 MT1GP13640 62 aa4.12□□□□□ -1.75
TRO-215ENST00000445561 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
TRO-215ENST00000445561 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
TRO-215ENST00000445561 MT1MQ8N339 61 aa4.08□□□□□ -1.76
TRO-215ENST00000445561 MACF1Q9UPN3 7388 aaKnown RBP4.02□□□□□ -1.77
TRO-215ENST00000445561 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
TRO-215ENST00000445561 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
TRO-215ENST00000445561 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
TRO-215ENST00000445561 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
TRO-215ENST00000445561 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
TRO-215ENST00000445561 MDN1Q9NU22 5596 aa3.9□□□□□ -1.78
TRO-215ENST00000445561 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
TRO-215ENST00000445561 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
TRO-215ENST00000445561 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
TRO-215ENST00000445561 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
TRO-215ENST00000445561 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
TRO-215ENST00000445561 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
TRO-215ENST00000445561 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
TRO-215ENST00000445561 MT1AP04731 61 aa3.64□□□□□ -1.83
TRO-215ENST00000445561 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
TRO-215ENST00000445561 SPRR2EP22531 72 aa3.61□□□□□ -1.83
TRO-215ENST00000445561 SPRR2BP35325 72 aa3.61□□□□□ -1.83
TRO-215ENST00000445561 SPRR2AP35326 72 aa3.61□□□□□ -1.83
TRO-215ENST00000445561 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
TRO-215ENST00000445561 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
TRO-215ENST00000445561 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
TRO-215ENST00000445561 NEBP20929 6669 aa3.52□□□□□ -1.85
TRO-215ENST00000445561 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
TRO-215ENST00000445561 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
TRO-215ENST00000445561 SPRR2DP22532 72 aa3.45□□□□□ -1.86
TRO-215ENST00000445561 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
TRO-215ENST00000445561 PRM1P04553 51 aa3.37□□□□□ -1.87
TRO-215ENST00000445561 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
TRO-215ENST00000445561 MT3P25713 68 aa3.28□□□□□ -1.88
TRO-215ENST00000445561 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
TRO-215ENST00000445561 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
TRO-215ENST00000445561 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
TRO-215ENST00000445561 MT4P47944 62 aa3.08□□□□□ -1.92
TRO-215ENST00000445561 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
TRO-215ENST00000445561 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
TRO-215ENST00000445561 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
TRO-215ENST00000445561 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
TRO-215ENST00000445561 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
TRO-215ENST00000445561 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
TRO-215ENST00000445561 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
TRO-215ENST00000445561 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
TRO-215ENST00000445561 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
TRO-215ENST00000445561 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
TRO-215ENST00000445561 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
TRO-215ENST00000445561 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
TRO-215ENST00000445561 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
TRO-215ENST00000445561 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
TRO-215ENST00000445561 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
TRO-215ENST00000445561 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
TRO-215ENST00000445561 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
TRO-215ENST00000445561 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
TRO-215ENST00000445561 LCE1CQ5T751 118 aa2.53□□□□□ -2.01
TRO-215ENST00000445561 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
TRO-215ENST00000445561 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
TRO-215ENST00000445561 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
TRO-215ENST00000445561 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
TRO-215ENST00000445561 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
TRO-215ENST00000445561 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
TRO-215ENST00000445561 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
TRO-215ENST00000445561 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
TRO-215ENST00000445561 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
TRO-215ENST00000445561 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
TRO-215ENST00000445561 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
TRO-215ENST00000445561 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 83.6 ms