RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 PSPHP1O15172 72 aa5.98□□□□□ -1.45
TSPAN9-204ENST00000444315 MT1LQ93083 61 aa5.95□□□□□ -1.46
TSPAN9-204ENST00000444315 MT1MQ8N339 61 aa5.93□□□□□ -1.46
TSPAN9-204ENST00000444315 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
TSPAN9-204ENST00000444315 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
TSPAN9-204ENST00000444315 Q1T7F1 81 aa5.86□□□□□ -1.47
TSPAN9-204ENST00000444315 KRTAP25-1Q3LHN0 102 aa5.85□□□□□ -1.47
TSPAN9-204ENST00000444315 A6NED7 52 aa5.82□□□□□ -1.48
TSPAN9-204ENST00000444315 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
TSPAN9-204ENST00000444315 MT4P47944 62 aa5.74□□□□□ -1.49
TSPAN9-204ENST00000444315 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
TSPAN9-204ENST00000444315 LCE1DQ5T752 114 aa5.71□□□□□ -1.5
TSPAN9-204ENST00000444315 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
TSPAN9-204ENST00000444315 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
TSPAN9-204ENST00000444315 HMCN1Q96RW7 5635 aa5.61□□□□□ -1.51
TSPAN9-204ENST00000444315 GPR98Q8WXG9 6306 aa5.61□□□□□ -1.51
TSPAN9-204ENST00000444315 PCP4P48539 62 aa5.59□□□□□ -1.51
TSPAN9-204ENST00000444315 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
TSPAN9-204ENST00000444315 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
TSPAN9-204ENST00000444315 KRTAP5-4Q6L8H1 288 aa5.53□□□□□ -1.52
TSPAN9-204ENST00000444315 ROMO1P60602 79 aa5.52□□□□□ -1.53
TSPAN9-204ENST00000444315 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
TSPAN9-204ENST00000444315 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
TSPAN9-204ENST00000444315 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
TSPAN9-204ENST00000444315 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
TSPAN9-204ENST00000444315 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
TSPAN9-204ENST00000444315 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
TSPAN9-204ENST00000444315 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
TSPAN9-204ENST00000444315 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
TSPAN9-204ENST00000444315 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
TSPAN9-204ENST00000444315 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
TSPAN9-204ENST00000444315 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
TSPAN9-204ENST00000444315 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
TSPAN9-204ENST00000444315 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
TSPAN9-204ENST00000444315 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
TSPAN9-204ENST00000444315 MT1AP04731 61 aa5.08□□□□□ -1.6
TSPAN9-204ENST00000444315 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
TSPAN9-204ENST00000444315 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
TSPAN9-204ENST00000444315 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
TSPAN9-204ENST00000444315 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
TSPAN9-204ENST00000444315 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
TSPAN9-204ENST00000444315 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
TSPAN9-204ENST00000444315 KRTAP6-2Q3LI66 62 aa4.83□□□□□ -1.64
TSPAN9-204ENST00000444315 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
TSPAN9-204ENST00000444315 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
TSPAN9-204ENST00000444315 MT3P25713 68 aa4.69□□□□□ -1.66
TSPAN9-204ENST00000444315 KRTAP5-8O75690 187 aa4.61□□□□□ -1.67
TSPAN9-204ENST00000444315 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
TSPAN9-204ENST00000444315 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
TSPAN9-204ENST00000444315 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
TSPAN9-204ENST00000444315 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
TSPAN9-204ENST00000444315 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
TSPAN9-204ENST00000444315 MUC5ACP98088 5654 aa4.4□□□□□ -1.7
TSPAN9-204ENST00000444315 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
TSPAN9-204ENST00000444315 PRO0628Q9UI54 55 aa4.33□□□□□ -1.72
TSPAN9-204ENST00000444315 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
TSPAN9-204ENST00000444315 KTN1-AS1Q86SY8 53 aa4.17□□□□□ -1.74
TSPAN9-204ENST00000444315 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
TSPAN9-204ENST00000444315 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
TSPAN9-204ENST00000444315 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
TSPAN9-204ENST00000444315 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
TSPAN9-204ENST00000444315 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
TSPAN9-204ENST00000444315 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
TSPAN9-204ENST00000444315 H3BS24 57 aa3.72□□□□□ -1.81
TSPAN9-204ENST00000444315 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
TSPAN9-204ENST00000444315 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
TSPAN9-204ENST00000444315 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
TSPAN9-204ENST00000444315 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
TSPAN9-204ENST00000444315 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
TSPAN9-204ENST00000444315 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
TSPAN9-204ENST00000444315 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
TSPAN9-204ENST00000444315 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
TSPAN9-204ENST00000444315 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
TSPAN9-204ENST00000444315 PRM1P04553 51 aa2.83□□□□□ -1.96
TSPAN9-204ENST00000444315 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
TSPAN9-204ENST00000444315 INE1O15225 51 aa2.56□□□□□ -2
TSPAN9-204ENST00000444315 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
TSPAN9-204ENST00000444315 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 26.8 ms