RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 KRTAP2-3P0C7H8 128 aa1.73□□□□□ -2.13
SCN11A-202ENST00000444237 KRTAP2-4Q9BYR9 128 aa1.73□□□□□ -2.13
SCN11A-202ENST00000444237 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
SCN11A-202ENST00000444237 UBR4Q5T4S7 5183 aa1.73□□□□□ -2.13
SCN11A-202ENST00000444237 MT1BP07438 61 aa1.72□□□□□ -2.13
SCN11A-202ENST00000444237 LCE3EQ5T5B0 92 aa1.71□□□□□ -2.14
SCN11A-202ENST00000444237 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
SCN11A-202ENST00000444237 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
SCN11A-202ENST00000444237 LCE3BQ5TA77 95 aa1.68□□□□□ -2.14
SCN11A-202ENST00000444237 KRTAP19-6Q3LI70 58 aa1.67□□□□□ -2.14
SCN11A-202ENST00000444237 PRM1P04553 51 aa1.66□□□□□ -2.14
SCN11A-202ENST00000444237 MT1GP13640 62 aa1.64□□□□□ -2.15
SCN11A-202ENST00000444237 KRTAP2-2Q9BYT5 123 aa1.64□□□□□ -2.15
SCN11A-202ENST00000444237 KRTAP4-8A0A0G2JLE6 195 aa1.63□□□□□ -2.15
SCN11A-202ENST00000444237 KRTAP4-8Q9BYQ9 185 aa1.63□□□□□ -2.15
SCN11A-202ENST00000444237 MT1LQ93083 61 aa1.63□□□□□ -2.15
SCN11A-202ENST00000444237 MT4P47944 62 aa1.6□□□□□ -2.15
SCN11A-202ENST00000444237 LCE4AQ5TA78 99 aa1.6□□□□□ -2.15
SCN11A-202ENST00000444237 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.16
SCN11A-202ENST00000444237 KRTAP4-7Q9BYR0 210 aa1.58□□□□□ -2.16
SCN11A-202ENST00000444237 MUC2Q02817 5179 aa1.58□□□□□ -2.16
SCN11A-202ENST00000444237 MT1EP04732 61 aa1.58□□□□□ -2.16
SCN11A-202ENST00000444237 FSIP2Q5CZC0 6907 aa1.57□□□□□ -2.16
SCN11A-202ENST00000444237 LCE1EQ5T753 118 aa1.54□□□□□ -2.16
SCN11A-202ENST00000444237 LCE1AQ5T7P2 110 aa1.53□□□□□ -2.17
SCN11A-202ENST00000444237 KRTAP19-3Q7Z4W3 81 aa1.53□□□□□ -2.17
SCN11A-202ENST00000444237 KRTAP5-3Q6L8H2 238 aa1.52□□□□□ -2.17
SCN11A-202ENST00000444237 KRTAP9-6A8MVA2 160 aa1.51□□□□□ -2.17
SCN11A-202ENST00000444237 MT1AP04731 61 aa1.51□□□□□ -2.17
SCN11A-202ENST00000444237 KRTAP4-2Q9BYR5 136 aa1.51□□□□□ -2.17
SCN11A-202ENST00000444237 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
SCN11A-202ENST00000444237 NEBP20929 6669 aa1.5□□□□□ -2.17
SCN11A-202ENST00000444237 KRTAP4-9Q9BYQ8 210 aa1.49□□□□□ -2.17
SCN11A-202ENST00000444237 LCE5AQ5TCM9 118 aa1.48□□□□□ -2.17
SCN11A-202ENST00000444237 MT1MQ8N339 61 aa1.48□□□□□ -2.17
SCN11A-202ENST00000444237 KRTAP19-7Q3SYF9 63 aa1.47□□□□□ -2.17
SCN11A-202ENST00000444237 KRTAP4-12Q9BQ66 201 aa1.45□□□□□ -2.18
SCN11A-202ENST00000444237 USH2AO75445 5202 aa1.45□□□□□ -2.18
SCN11A-202ENST00000444237 KRTAP4-3Q9BYR4 195 aa1.45□□□□□ -2.18
SCN11A-202ENST00000444237 KRTAP6-2Q3LI66 62 aa1.44□□□□□ -2.18
SCN11A-202ENST00000444237 SYNE1Q8NF91 8797 aaKnown RBP1.44□□□□□ -2.18
SCN11A-202ENST00000444237 LCE1DQ5T752 114 aa1.43□□□□□ -2.18
SCN11A-202ENST00000444237 OBSCNQ5VST9 7968 aa1.43□□□□□ -2.18
SCN11A-202ENST00000444237 MACF1Q9UPN3 7388 aaKnown RBP1.4□□□□□ -2.19
SCN11A-202ENST00000444237 SSPOA2VEC9 5147 aa1.4□□□□□ -2.19
SCN11A-202ENST00000444237 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
SCN11A-202ENST00000444237 KRTAP5-9P26371 169 aa1.37□□□□□ -2.19
SCN11A-202ENST00000444237 FCGBPQ9Y6R7 5405 aaPredicted RBP1.35□□□□□ -2.19
SCN11A-202ENST00000444237 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
SCN11A-202ENST00000444237 GPR98Q8WXG9 6306 aa1.33□□□□□ -2.2
SCN11A-202ENST00000444237 KRTAP6-1Q3LI64 71 aa1.33□□□□□ -2.2
SCN11A-202ENST00000444237 KMT2DO14686 5537 aa1.31□□□□□ -2.2
SCN11A-202ENST00000444237 LCE1BQ5T7P3 118 aa1.28□□□□□ -2.2
SCN11A-202ENST00000444237 KRTAP5-5Q701N2 237 aaPredicted RBP1.24□□□□□ -2.21
SCN11A-202ENST00000444237 KRTAP5-2Q701N4 177 aa1.23□□□□□ -2.21
SCN11A-202ENST00000444237 HMCN1Q96RW7 5635 aa1.2□□□□□ -2.22
SCN11A-202ENST00000444237 LCE1CQ5T751 118 aa1.2□□□□□ -2.22
SCN11A-202ENST00000444237 KRTAP5-4Q6L8H1 288 aa1.19□□□□□ -2.22
SCN11A-202ENST00000444237 MUC12Q9UKN1 5478 aa1.19□□□□□ -2.22
SCN11A-202ENST00000444237 KRTAP4-11Q9BYQ6 195 aa1.19□□□□□ -2.22
SCN11A-202ENST00000444237 KRTAP20-2Q3LI61 65 aa1.17□□□□□ -2.22
SCN11A-202ENST00000444237 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
SCN11A-202ENST00000444237 MDN1Q9NU22 5596 aa1.13□□□□□ -2.23
SCN11A-202ENST00000444237 KRTAP5-7Q6L8G8 165 aa1.08□□□□□ -2.24
SCN11A-202ENST00000444237 MUC5BQ9HC84 5762 aaPredicted RBP1.06□□□□□ -2.24
SCN11A-202ENST00000444237 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
SCN11A-202ENST00000444237 KRTAP5-11Q6L8G4 156 aa1.03□□□□□ -2.25
SCN11A-202ENST00000444237 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
SCN11A-202ENST00000444237 KRTAP5-8O75690 187 aa1□□□□□ -2.25
SCN11A-202ENST00000444237 AHNAKQ09666 5890 aaKnown RBP1□□□□□ -2.25
SCN11A-202ENST00000444237 KRTAP4-4Q9BYR3 166 aa0.98□□□□□ -2.25
SCN11A-202ENST00000444237 KRTAP5-1Q6L8H4 278 aa0.98□□□□□ -2.25
SCN11A-202ENST00000444237 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
SCN11A-202ENST00000444237 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
SCN11A-202ENST00000444237 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
SCN11A-202ENST00000444237 KRTAP21-2Q3LI59 83 aa0.71□□□□□ -2.3
SCN11A-202ENST00000444237 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 90.5 ms