RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MT1EP04732 61 aa4.85□□□□□ -1.63
SMARCA4-204ENST00000444061 MT1LQ93083 61 aa4.8□□□□□ -1.64
SMARCA4-204ENST00000444061 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
SMARCA4-204ENST00000444061 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
SMARCA4-204ENST00000444061 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.66
SMARCA4-204ENST00000444061 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
SMARCA4-204ENST00000444061 MT1MQ8N339 61 aa4.67□□□□□ -1.66
SMARCA4-204ENST00000444061 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
SMARCA4-204ENST00000444061 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
SMARCA4-204ENST00000444061 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
SMARCA4-204ENST00000444061 USH2AO75445 5202 aa4.61□□□□□ -1.67
SMARCA4-204ENST00000444061 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
SMARCA4-204ENST00000444061 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
SMARCA4-204ENST00000444061 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
SMARCA4-204ENST00000444061 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
SMARCA4-204ENST00000444061 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
SMARCA4-204ENST00000444061 MT4P47944 62 aa4.47□□□□□ -1.69
SMARCA4-204ENST00000444061 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
SMARCA4-204ENST00000444061 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
SMARCA4-204ENST00000444061 LOC100996750A0A140TA64 210 aa4.39□□□□□ -1.71
SMARCA4-204ENST00000444061 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
SMARCA4-204ENST00000444061 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.72
SMARCA4-204ENST00000444061 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
SMARCA4-204ENST00000444061 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
SMARCA4-204ENST00000444061 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
SMARCA4-204ENST00000444061 MT3P25713 68 aa4.28□□□□□ -1.72
SMARCA4-204ENST00000444061 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
SMARCA4-204ENST00000444061 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
SMARCA4-204ENST00000444061 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
SMARCA4-204ENST00000444061 MT1AP04731 61 aa4.24□□□□□ -1.73
SMARCA4-204ENST00000444061 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
SMARCA4-204ENST00000444061 KMT2DO14686 5537 aa4.16□□□□□ -1.74
SMARCA4-204ENST00000444061 LCE4AQ5TA78 99 aa4.15□□□□□ -1.74
SMARCA4-204ENST00000444061 KRTAP4-9Q9BYQ8 210 aa4.11□□□□□ -1.75
SMARCA4-204ENST00000444061 NEBP20929 6669 aa4.09□□□□□ -1.75
SMARCA4-204ENST00000444061 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
SMARCA4-204ENST00000444061 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
SMARCA4-204ENST00000444061 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
SMARCA4-204ENST00000444061 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
SMARCA4-204ENST00000444061 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
SMARCA4-204ENST00000444061 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
SMARCA4-204ENST00000444061 PRM1P04553 51 aa3.97□□□□□ -1.77
SMARCA4-204ENST00000444061 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
SMARCA4-204ENST00000444061 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
SMARCA4-204ENST00000444061 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
SMARCA4-204ENST00000444061 MDN1Q9NU22 5596 aa3.88□□□□□ -1.79
SMARCA4-204ENST00000444061 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
SMARCA4-204ENST00000444061 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
SMARCA4-204ENST00000444061 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
SMARCA4-204ENST00000444061 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
SMARCA4-204ENST00000444061 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
SMARCA4-204ENST00000444061 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
SMARCA4-204ENST00000444061 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
SMARCA4-204ENST00000444061 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
SMARCA4-204ENST00000444061 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SMARCA4-204ENST00000444061 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SMARCA4-204ENST00000444061 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
SMARCA4-204ENST00000444061 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
SMARCA4-204ENST00000444061 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
SMARCA4-204ENST00000444061 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
SMARCA4-204ENST00000444061 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
SMARCA4-204ENST00000444061 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
SMARCA4-204ENST00000444061 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
SMARCA4-204ENST00000444061 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
SMARCA4-204ENST00000444061 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
SMARCA4-204ENST00000444061 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SMARCA4-204ENST00000444061 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
SMARCA4-204ENST00000444061 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
SMARCA4-204ENST00000444061 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
SMARCA4-204ENST00000444061 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
SMARCA4-204ENST00000444061 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
SMARCA4-204ENST00000444061 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
SMARCA4-204ENST00000444061 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
SMARCA4-204ENST00000444061 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
SMARCA4-204ENST00000444061 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
SMARCA4-204ENST00000444061 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
SMARCA4-204ENST00000444061 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms