RNA–Protein interactions for RNA: ENST00000443875.5

C1S-208, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 2,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-208ENST00000443875 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
C1S-208ENST00000443875 LCE2BO14633 110 aa3.21□□□□□ -1.9
C1S-208ENST00000443875 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
C1S-208ENST00000443875 MT1LQ93083 61 aa3.19□□□□□ -1.9
C1S-208ENST00000443875 USH2AO75445 5202 aa3.18□□□□□ -1.9
C1S-208ENST00000443875 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
C1S-208ENST00000443875 MT1EP04732 61 aa3.13□□□□□ -1.91
C1S-208ENST00000443875 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
C1S-208ENST00000443875 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
C1S-208ENST00000443875 LOC100996750A0A140TA64 210 aa3.06□□□□□ -1.92
C1S-208ENST00000443875 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
C1S-208ENST00000443875 MT1GP13640 62 aa3.01□□□□□ -1.93
C1S-208ENST00000443875 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
C1S-208ENST00000443875 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
C1S-208ENST00000443875 NEBP20929 6669 aa2.95□□□□□ -1.94
C1S-208ENST00000443875 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
C1S-208ENST00000443875 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
C1S-208ENST00000443875 MT1MQ8N339 61 aa2.91□□□□□ -1.94
C1S-208ENST00000443875 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
C1S-208ENST00000443875 LCE3BQ5TA77 95 aa2.86□□□□□ -1.95
C1S-208ENST00000443875 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
C1S-208ENST00000443875 MT1AP04731 61 aa2.84□□□□□ -1.95
C1S-208ENST00000443875 PRM1P04553 51 aa2.82□□□□□ -1.96
C1S-208ENST00000443875 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
C1S-208ENST00000443875 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
C1S-208ENST00000443875 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
C1S-208ENST00000443875 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
C1S-208ENST00000443875 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
C1S-208ENST00000443875 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
C1S-208ENST00000443875 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
C1S-208ENST00000443875 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
C1S-208ENST00000443875 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
C1S-208ENST00000443875 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
C1S-208ENST00000443875 DSTQ03001 7570 aaKnown RBP2.71□□□□□ -1.98
C1S-208ENST00000443875 SPRR2EP22531 72 aa2.64□□□□□ -1.99
C1S-208ENST00000443875 SPRR2BP35325 72 aa2.64□□□□□ -1.99
C1S-208ENST00000443875 SPRR2AP35326 72 aa2.64□□□□□ -1.99
C1S-208ENST00000443875 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
C1S-208ENST00000443875 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
C1S-208ENST00000443875 LCE1AQ5T7P2 110 aa2.59□□□□□ -1.99
C1S-208ENST00000443875 SPRR2FQ96RM1 72 aa2.59□□□□□ -1.99
C1S-208ENST00000443875 SPRR2DP22532 72 aa2.57□□□□□ -2
C1S-208ENST00000443875 KRTAP9-4Q9BYQ2 154 aa2.47□□□□□ -2.01
C1S-208ENST00000443875 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
C1S-208ENST00000443875 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
C1S-208ENST00000443875 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
C1S-208ENST00000443875 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
C1S-208ENST00000443875 MT3P25713 68 aa2.36□□□□□ -2.03
C1S-208ENST00000443875 LCE1DQ5T752 114 aa2.34□□□□□ -2.03
C1S-208ENST00000443875 LCE4AQ5TA78 99 aa2.33□□□□□ -2.04
C1S-208ENST00000443875 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
C1S-208ENST00000443875 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
C1S-208ENST00000443875 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
C1S-208ENST00000443875 KRTAP4-6Q9BYQ5 205 aa2.26□□□□□ -2.05
C1S-208ENST00000443875 MT4P47944 62 aa2.21□□□□□ -2.06
C1S-208ENST00000443875 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
C1S-208ENST00000443875 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
C1S-208ENST00000443875 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
C1S-208ENST00000443875 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.07
C1S-208ENST00000443875 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
C1S-208ENST00000443875 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
C1S-208ENST00000443875 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
C1S-208ENST00000443875 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
C1S-208ENST00000443875 KRTAP9-9Q9BYP9 154 aa1.93□□□□□ -2.1
C1S-208ENST00000443875 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
C1S-208ENST00000443875 KRTAP4-12Q9BQ66 201 aa1.91□□□□□ -2.1
C1S-208ENST00000443875 LCE1FQ5T754 118 aa1.86□□□□□ -2.11
C1S-208ENST00000443875 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
C1S-208ENST00000443875 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
C1S-208ENST00000443875 KRTAP4-2Q9BYR5 136 aa1.77□□□□□ -2.13
C1S-208ENST00000443875 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
C1S-208ENST00000443875 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
C1S-208ENST00000443875 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
C1S-208ENST00000443875 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
C1S-208ENST00000443875 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
C1S-208ENST00000443875 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
C1S-208ENST00000443875 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
C1S-208ENST00000443875 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 42.4 ms