RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 MT1LQ93083 61 aa6.49□□□□□ -1.37
PAXBP1-204ENST00000443785 MT1EP04732 61 aa6.46□□□□□ -1.37
PAXBP1-204ENST00000443785 SYNE1Q8NF91 8797 aaKnown RBP6.39□□□□□ -1.39
PAXBP1-204ENST00000443785 MT1GP13640 62 aa6.36□□□□□ -1.39
PAXBP1-204ENST00000443785 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
PAXBP1-204ENST00000443785 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
PAXBP1-204ENST00000443785 KRTAP2-1Q9BYU5 128 aa6.3□□□□□ -1.4
PAXBP1-204ENST00000443785 OBSCNQ5VST9 7968 aa6.29□□□□□ -1.4
PAXBP1-204ENST00000443785 LCE2DQ5TA82 110 aaPredicted RBP6.22□□□□□ -1.41
PAXBP1-204ENST00000443785 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
PAXBP1-204ENST00000443785 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.43
PAXBP1-204ENST00000443785 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
PAXBP1-204ENST00000443785 MT1MQ8N339 61 aa6.06□□□□□ -1.44
PAXBP1-204ENST00000443785 SPRR2FQ96RM1 72 aa6.03□□□□□ -1.44
PAXBP1-204ENST00000443785 MDN1Q9NU22 5596 aa6.03□□□□□ -1.44
PAXBP1-204ENST00000443785 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
PAXBP1-204ENST00000443785 KRTAP4-9Q9BYQ8 210 aa5.99□□□□□ -1.45
PAXBP1-204ENST00000443785 LCE3BQ5TA77 95 aa5.96□□□□□ -1.45
PAXBP1-204ENST00000443785 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
PAXBP1-204ENST00000443785 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
PAXBP1-204ENST00000443785 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
PAXBP1-204ENST00000443785 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
PAXBP1-204ENST00000443785 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.51
PAXBP1-204ENST00000443785 KRTAP9-6A0A140TA67 174 aa5.44□□□□□ -1.54
PAXBP1-204ENST00000443785 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
PAXBP1-204ENST00000443785 LCE3DQ9BYE3 92 aa5.4□□□□□ -1.55
PAXBP1-204ENST00000443785 LCE1AQ5T7P2 110 aa5.39□□□□□ -1.55
PAXBP1-204ENST00000443785 SPRR2EP22531 72 aa5.38□□□□□ -1.55
PAXBP1-204ENST00000443785 SPRR2BP35325 72 aa5.38□□□□□ -1.55
PAXBP1-204ENST00000443785 SPRR2AP35326 72 aa5.38□□□□□ -1.55
PAXBP1-204ENST00000443785 MT1AP04731 61 aa5.32□□□□□ -1.56
PAXBP1-204ENST00000443785 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
PAXBP1-204ENST00000443785 PRM1P04553 51 aa5.27□□□□□ -1.57
PAXBP1-204ENST00000443785 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
PAXBP1-204ENST00000443785 KRTAP5-5Q701N2 237 aaPredicted RBP5.21□□□□□ -1.57
PAXBP1-204ENST00000443785 SPRR2DP22532 72 aa5.1□□□□□ -1.59
PAXBP1-204ENST00000443785 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.6
PAXBP1-204ENST00000443785 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
PAXBP1-204ENST00000443785 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
PAXBP1-204ENST00000443785 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
PAXBP1-204ENST00000443785 MT3P25713 68 aa4.82□□□□□ -1.64
PAXBP1-204ENST00000443785 NEBP20929 6669 aa4.81□□□□□ -1.64
PAXBP1-204ENST00000443785 MT4P47944 62 aa4.77□□□□□ -1.65
PAXBP1-204ENST00000443785 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
PAXBP1-204ENST00000443785 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
PAXBP1-204ENST00000443785 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
PAXBP1-204ENST00000443785 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
PAXBP1-204ENST00000443785 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
PAXBP1-204ENST00000443785 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
PAXBP1-204ENST00000443785 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
PAXBP1-204ENST00000443785 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
PAXBP1-204ENST00000443785 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
PAXBP1-204ENST00000443785 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
PAXBP1-204ENST00000443785 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
PAXBP1-204ENST00000443785 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
PAXBP1-204ENST00000443785 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
PAXBP1-204ENST00000443785 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
PAXBP1-204ENST00000443785 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
PAXBP1-204ENST00000443785 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
PAXBP1-204ENST00000443785 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
PAXBP1-204ENST00000443785 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
PAXBP1-204ENST00000443785 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
PAXBP1-204ENST00000443785 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
PAXBP1-204ENST00000443785 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
PAXBP1-204ENST00000443785 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
PAXBP1-204ENST00000443785 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
PAXBP1-204ENST00000443785 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
PAXBP1-204ENST00000443785 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
PAXBP1-204ENST00000443785 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
PAXBP1-204ENST00000443785 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
PAXBP1-204ENST00000443785 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
PAXBP1-204ENST00000443785 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
PAXBP1-204ENST00000443785 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
PAXBP1-204ENST00000443785 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
PAXBP1-204ENST00000443785 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
PAXBP1-204ENST00000443785 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
PAXBP1-204ENST00000443785 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
PAXBP1-204ENST00000443785 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 37.6 ms