RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
CCDC113-202ENST00000443128 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
CCDC113-202ENST00000443128 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
CCDC113-202ENST00000443128 LCE2DQ5TA82 110 aaPredicted RBP2.98□□□□□ -1.93
CCDC113-202ENST00000443128 MT1EP04732 61 aa2.96□□□□□ -1.94
CCDC113-202ENST00000443128 SPRR2DP22532 72 aa2.95□□□□□ -1.94
CCDC113-202ENST00000443128 MT1LQ93083 61 aa2.95□□□□□ -1.94
CCDC113-202ENST00000443128 KRTAP4-7Q9BYR0 210 aa2.95□□□□□ -1.94
CCDC113-202ENST00000443128 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
CCDC113-202ENST00000443128 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
CCDC113-202ENST00000443128 LCE3BQ5TA77 95 aa2.9□□□□□ -1.95
CCDC113-202ENST00000443128 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
CCDC113-202ENST00000443128 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
CCDC113-202ENST00000443128 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
CCDC113-202ENST00000443128 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
CCDC113-202ENST00000443128 MT1MQ8N339 61 aa2.84□□□□□ -1.96
CCDC113-202ENST00000443128 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
CCDC113-202ENST00000443128 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
CCDC113-202ENST00000443128 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
CCDC113-202ENST00000443128 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.79□□□□□ -1.96
CCDC113-202ENST00000443128 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
CCDC113-202ENST00000443128 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
CCDC113-202ENST00000443128 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.99
CCDC113-202ENST00000443128 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
CCDC113-202ENST00000443128 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
CCDC113-202ENST00000443128 MDN1Q9NU22 5596 aa2.62□□□□□ -1.99
CCDC113-202ENST00000443128 MT4P47944 62 aa2.62□□□□□ -1.99
CCDC113-202ENST00000443128 LCE1AQ5T7P2 110 aa2.62□□□□□ -1.99
CCDC113-202ENST00000443128 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
CCDC113-202ENST00000443128 MT3P25713 68 aa2.58□□□□□ -2
CCDC113-202ENST00000443128 MT1AP04731 61 aa2.58□□□□□ -2
CCDC113-202ENST00000443128 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
CCDC113-202ENST00000443128 KRTAP2-3P0C7H8 128 aa2.55□□□□□ -2
CCDC113-202ENST00000443128 KRTAP2-4Q9BYR9 128 aa2.55□□□□□ -2
CCDC113-202ENST00000443128 KRTAP2-1Q9BYU5 128 aa2.55□□□□□ -2
CCDC113-202ENST00000443128 KRTAP4-9Q9BYQ8 210 aa2.5□□□□□ -2.01
CCDC113-202ENST00000443128 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
CCDC113-202ENST00000443128 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
CCDC113-202ENST00000443128 KRTAP2-2Q9BYT5 123 aa2.44□□□□□ -2.02
CCDC113-202ENST00000443128 NEBP20929 6669 aa2.43□□□□□ -2.02
CCDC113-202ENST00000443128 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
CCDC113-202ENST00000443128 KRTAP9-4Q9BYQ2 154 aa2.4□□□□□ -2.03
CCDC113-202ENST00000443128 LCE1DQ5T752 114 aa2.4□□□□□ -2.03
CCDC113-202ENST00000443128 PRM1P04553 51 aa2.4□□□□□ -2.03
CCDC113-202ENST00000443128 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
CCDC113-202ENST00000443128 LCE4AQ5TA78 99 aa2.36□□□□□ -2.03
CCDC113-202ENST00000443128 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
CCDC113-202ENST00000443128 KRTAP4-6Q9BYQ5 205 aa2.23□□□□□ -2.05
CCDC113-202ENST00000443128 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
CCDC113-202ENST00000443128 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
CCDC113-202ENST00000443128 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
CCDC113-202ENST00000443128 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
CCDC113-202ENST00000443128 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
CCDC113-202ENST00000443128 MUC5ACP98088 5654 aa2□□□□□ -2.09
CCDC113-202ENST00000443128 KRTAP9-9Q9BYP9 154 aa1.93□□□□□ -2.1
CCDC113-202ENST00000443128 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
CCDC113-202ENST00000443128 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
CCDC113-202ENST00000443128 LCE1FQ5T754 118 aa1.91□□□□□ -2.1
CCDC113-202ENST00000443128 KRTAP4-11Q9BYQ6 195 aa1.9□□□□□ -2.11
CCDC113-202ENST00000443128 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
CCDC113-202ENST00000443128 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
CCDC113-202ENST00000443128 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
CCDC113-202ENST00000443128 KRTAP4-12Q9BQ66 201 aa1.76□□□□□ -2.13
CCDC113-202ENST00000443128 KRTAP4-2Q9BYR5 136 aa1.76□□□□□ -2.13
CCDC113-202ENST00000443128 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
CCDC113-202ENST00000443128 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
CCDC113-202ENST00000443128 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
CCDC113-202ENST00000443128 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
CCDC113-202ENST00000443128 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
CCDC113-202ENST00000443128 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
CCDC113-202ENST00000443128 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
CCDC113-202ENST00000443128 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
CCDC113-202ENST00000443128 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
CCDC113-202ENST00000443128 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
CCDC113-202ENST00000443128 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
CCDC113-202ENST00000443128 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
CCDC113-202ENST00000443128 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 109.3 ms