RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 MT1MQ8N339 61 aa4.46□□□□□ -1.7
CPSF4-206ENST00000441580 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.7
CPSF4-206ENST00000441580 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
CPSF4-206ENST00000441580 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
CPSF4-206ENST00000441580 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
CPSF4-206ENST00000441580 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
CPSF4-206ENST00000441580 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
CPSF4-206ENST00000441580 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
CPSF4-206ENST00000441580 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
CPSF4-206ENST00000441580 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
CPSF4-206ENST00000441580 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
CPSF4-206ENST00000441580 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
CPSF4-206ENST00000441580 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
CPSF4-206ENST00000441580 SPRR2EP22531 72 aa4.24□□□□□ -1.73
CPSF4-206ENST00000441580 SPRR2BP35325 72 aa4.24□□□□□ -1.73
CPSF4-206ENST00000441580 SPRR2AP35326 72 aa4.24□□□□□ -1.73
CPSF4-206ENST00000441580 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
CPSF4-206ENST00000441580 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
CPSF4-206ENST00000441580 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
CPSF4-206ENST00000441580 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
CPSF4-206ENST00000441580 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
CPSF4-206ENST00000441580 INE1O15225 51 aa4.12□□□□□ -1.75
CPSF4-206ENST00000441580 SPRR2DP22532 72 aa4.09□□□□□ -1.75
CPSF4-206ENST00000441580 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
CPSF4-206ENST00000441580 MT1AP04731 61 aa4.01□□□□□ -1.77
CPSF4-206ENST00000441580 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
CPSF4-206ENST00000441580 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
CPSF4-206ENST00000441580 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
CPSF4-206ENST00000441580 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
CPSF4-206ENST00000441580 NEBP20929 6669 aa3.85□□□□□ -1.79
CPSF4-206ENST00000441580 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
CPSF4-206ENST00000441580 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
CPSF4-206ENST00000441580 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
CPSF4-206ENST00000441580 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
CPSF4-206ENST00000441580 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
CPSF4-206ENST00000441580 MT3P25713 68 aa3.61□□□□□ -1.83
CPSF4-206ENST00000441580 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
CPSF4-206ENST00000441580 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
CPSF4-206ENST00000441580 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
CPSF4-206ENST00000441580 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
CPSF4-206ENST00000441580 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
CPSF4-206ENST00000441580 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
CPSF4-206ENST00000441580 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
CPSF4-206ENST00000441580 MT4P47944 62 aa3.5□□□□□ -1.85
CPSF4-206ENST00000441580 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
CPSF4-206ENST00000441580 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
CPSF4-206ENST00000441580 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
CPSF4-206ENST00000441580 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
CPSF4-206ENST00000441580 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
CPSF4-206ENST00000441580 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
CPSF4-206ENST00000441580 PRM1P04553 51 aa3.14□□□□□ -1.91
CPSF4-206ENST00000441580 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
CPSF4-206ENST00000441580 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
CPSF4-206ENST00000441580 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
CPSF4-206ENST00000441580 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
CPSF4-206ENST00000441580 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
CPSF4-206ENST00000441580 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
CPSF4-206ENST00000441580 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
CPSF4-206ENST00000441580 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
CPSF4-206ENST00000441580 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
CPSF4-206ENST00000441580 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
CPSF4-206ENST00000441580 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
CPSF4-206ENST00000441580 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
CPSF4-206ENST00000441580 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
CPSF4-206ENST00000441580 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
CPSF4-206ENST00000441580 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
CPSF4-206ENST00000441580 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
CPSF4-206ENST00000441580 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
CPSF4-206ENST00000441580 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
CPSF4-206ENST00000441580 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
CPSF4-206ENST00000441580 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
CPSF4-206ENST00000441580 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
CPSF4-206ENST00000441580 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
CPSF4-206ENST00000441580 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
CPSF4-206ENST00000441580 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
CPSF4-206ENST00000441580 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
CPSF4-206ENST00000441580 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 85.6 ms