RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
SMPD4-209ENST00000439886 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
SMPD4-209ENST00000439886 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
SMPD4-209ENST00000439886 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
SMPD4-209ENST00000439886 SSPOA2VEC9 5147 aa3.86□□□□□ -1.79
SMPD4-209ENST00000439886 MT1GP13640 62 aa3.86□□□□□ -1.79
SMPD4-209ENST00000439886 MT1LQ93083 61 aa3.86□□□□□ -1.79
SMPD4-209ENST00000439886 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.79
SMPD4-209ENST00000439886 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
SMPD4-209ENST00000439886 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
SMPD4-209ENST00000439886 MT1EP04732 61 aa3.8□□□□□ -1.8
SMPD4-209ENST00000439886 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
SMPD4-209ENST00000439886 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
SMPD4-209ENST00000439886 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
SMPD4-209ENST00000439886 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
SMPD4-209ENST00000439886 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
SMPD4-209ENST00000439886 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.83
SMPD4-209ENST00000439886 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
SMPD4-209ENST00000439886 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
SMPD4-209ENST00000439886 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
SMPD4-209ENST00000439886 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
SMPD4-209ENST00000439886 PRM1P04553 51 aa3.57□□□□□ -1.84
SMPD4-209ENST00000439886 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
SMPD4-209ENST00000439886 MT1MQ8N339 61 aa3.56□□□□□ -1.84
SMPD4-209ENST00000439886 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
SMPD4-209ENST00000439886 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
SMPD4-209ENST00000439886 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
SMPD4-209ENST00000439886 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
SMPD4-209ENST00000439886 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.85
SMPD4-209ENST00000439886 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
SMPD4-209ENST00000439886 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
SMPD4-209ENST00000439886 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
SMPD4-209ENST00000439886 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
SMPD4-209ENST00000439886 LCE5AQ5TCM9 118 aa3.26□□□□□ -1.89
SMPD4-209ENST00000439886 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
SMPD4-209ENST00000439886 MT1AP04731 61 aa3.23□□□□□ -1.89
SMPD4-209ENST00000439886 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.89
SMPD4-209ENST00000439886 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
SMPD4-209ENST00000439886 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
SMPD4-209ENST00000439886 SPRR2EP22531 72 aa3.19□□□□□ -1.9
SMPD4-209ENST00000439886 SPRR2BP35325 72 aa3.19□□□□□ -1.9
SMPD4-209ENST00000439886 SPRR2AP35326 72 aa3.19□□□□□ -1.9
SMPD4-209ENST00000439886 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
SMPD4-209ENST00000439886 NEBP20929 6669 aa3.09□□□□□ -1.91
SMPD4-209ENST00000439886 SPRR2DP22532 72 aa3.07□□□□□ -1.92
SMPD4-209ENST00000439886 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
SMPD4-209ENST00000439886 MT3P25713 68 aa2.94□□□□□ -1.94
SMPD4-209ENST00000439886 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
SMPD4-209ENST00000439886 MT4P47944 62 aa2.75□□□□□ -1.97
SMPD4-209ENST00000439886 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
SMPD4-209ENST00000439886 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
SMPD4-209ENST00000439886 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
SMPD4-209ENST00000439886 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
SMPD4-209ENST00000439886 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
SMPD4-209ENST00000439886 LCE4AQ5TA78 99 aa2.62□□□□□ -1.99
SMPD4-209ENST00000439886 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
SMPD4-209ENST00000439886 MUC5ACP98088 5654 aa2.53□□□□□ -2
SMPD4-209ENST00000439886 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.02
SMPD4-209ENST00000439886 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
SMPD4-209ENST00000439886 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
SMPD4-209ENST00000439886 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
SMPD4-209ENST00000439886 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
SMPD4-209ENST00000439886 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
SMPD4-209ENST00000439886 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
SMPD4-209ENST00000439886 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
SMPD4-209ENST00000439886 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
SMPD4-209ENST00000439886 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
SMPD4-209ENST00000439886 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
SMPD4-209ENST00000439886 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
SMPD4-209ENST00000439886 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
SMPD4-209ENST00000439886 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
SMPD4-209ENST00000439886 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
SMPD4-209ENST00000439886 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
SMPD4-209ENST00000439886 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
SMPD4-209ENST00000439886 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
SMPD4-209ENST00000439886 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
SMPD4-209ENST00000439886 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
SMPD4-209ENST00000439886 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 51.3 ms