RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
BDNF-211ENST00000439476 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
BDNF-211ENST00000439476 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
BDNF-211ENST00000439476 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
BDNF-211ENST00000439476 KRTAP4-7Q9BYR0 210 aa2.13□□□□□ -2.07
BDNF-211ENST00000439476 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
BDNF-211ENST00000439476 KRTAP9-2Q9BYQ4 174 aa2.12□□□□□ -2.07
BDNF-211ENST00000439476 SPRR2EP22531 72 aa2.12□□□□□ -2.07
BDNF-211ENST00000439476 SPRR2BP35325 72 aa2.12□□□□□ -2.07
BDNF-211ENST00000439476 SPRR2AP35326 72 aa2.12□□□□□ -2.07
BDNF-211ENST00000439476 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
BDNF-211ENST00000439476 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.11□□□□□ -2.07
BDNF-211ENST00000439476 MT1LQ93083 61 aa2.1□□□□□ -2.07
BDNF-211ENST00000439476 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
BDNF-211ENST00000439476 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
BDNF-211ENST00000439476 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
BDNF-211ENST00000439476 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.07
BDNF-211ENST00000439476 LCE3BQ5TA77 95 aa2.09□□□□□ -2.07
BDNF-211ENST00000439476 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.08
BDNF-211ENST00000439476 KRTAP9-7A8MTY7 169 aa2.08□□□□□ -2.08
BDNF-211ENST00000439476 SPRR2DP22532 72 aa2.07□□□□□ -2.08
BDNF-211ENST00000439476 KMT2DO14686 5537 aa2.07□□□□□ -2.08
BDNF-211ENST00000439476 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
BDNF-211ENST00000439476 KRTAP19-3Q7Z4W3 81 aa2.06□□□□□ -2.08
BDNF-211ENST00000439476 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
BDNF-211ENST00000439476 MT1EP04732 61 aa2.05□□□□□ -2.08
BDNF-211ENST00000439476 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
BDNF-211ENST00000439476 LCE1DQ5T752 114 aa2.05□□□□□ -2.08
BDNF-211ENST00000439476 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
BDNF-211ENST00000439476 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
BDNF-211ENST00000439476 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
BDNF-211ENST00000439476 KRTAP19-7Q3SYF9 63 aa2.03□□□□□ -2.08
BDNF-211ENST00000439476 LCE5AQ5TCM9 118 aa2.02□□□□□ -2.09
BDNF-211ENST00000439476 KRTAP9-6A8MVA2 160 aa2.02□□□□□ -2.09
BDNF-211ENST00000439476 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
BDNF-211ENST00000439476 FSIP2Q5CZC0 6907 aa2□□□□□ -2.09
BDNF-211ENST00000439476 KRTAP9-9Q9BYP9 154 aa2□□□□□ -2.09
BDNF-211ENST00000439476 KRTAP9-4Q9BYQ2 154 aa2□□□□□ -2.09
BDNF-211ENST00000439476 PRM1P04553 51 aa1.98□□□□□ -2.09
BDNF-211ENST00000439476 KRTAP19-6Q3LI70 58 aa1.98□□□□□ -2.09
BDNF-211ENST00000439476 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
BDNF-211ENST00000439476 LCE4AQ5TA78 99 aa1.96□□□□□ -2.1
BDNF-211ENST00000439476 MT1MQ8N339 61 aa1.95□□□□□ -2.1
BDNF-211ENST00000439476 SYNE2Q8WXH0 6885 aaKnown RBP1.91□□□□□ -2.1
BDNF-211ENST00000439476 KRTAP5-9P26371 169 aa1.9□□□□□ -2.1
BDNF-211ENST00000439476 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.1
BDNF-211ENST00000439476 FCGBPQ9Y6R7 5405 aaPredicted RBP1.9□□□□□ -2.11
BDNF-211ENST00000439476 MT1AP04731 61 aa1.88□□□□□ -2.11
BDNF-211ENST00000439476 KRTAP4-9Q9BYQ8 210 aa1.85□□□□□ -2.11
BDNF-211ENST00000439476 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
BDNF-211ENST00000439476 MDN1Q9NU22 5596 aa1.83□□□□□ -2.12
BDNF-211ENST00000439476 MT4P47944 62 aa1.82□□□□□ -2.12
BDNF-211ENST00000439476 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
BDNF-211ENST00000439476 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
BDNF-211ENST00000439476 KRTAP4-11Q9BYQ6 195 aa1.74□□□□□ -2.13
BDNF-211ENST00000439476 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
BDNF-211ENST00000439476 NEBP20929 6669 aa1.69□□□□□ -2.14
BDNF-211ENST00000439476 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
BDNF-211ENST00000439476 KRTAP5-4Q6L8H1 288 aa1.68□□□□□ -2.14
BDNF-211ENST00000439476 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
BDNF-211ENST00000439476 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
BDNF-211ENST00000439476 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
BDNF-211ENST00000439476 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
BDNF-211ENST00000439476 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
BDNF-211ENST00000439476 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
BDNF-211ENST00000439476 KRTAP4-4Q9BYR3 166 aa1.43□□□□□ -2.18
BDNF-211ENST00000439476 KRTAP20-2Q3LI61 65 aa1.37□□□□□ -2.19
BDNF-211ENST00000439476 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
BDNF-211ENST00000439476 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
BDNF-211ENST00000439476 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
BDNF-211ENST00000439476 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
BDNF-211ENST00000439476 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
BDNF-211ENST00000439476 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
BDNF-211ENST00000439476 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
BDNF-211ENST00000439476 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
BDNF-211ENST00000439476 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
BDNF-211ENST00000439476 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 167.3 ms