RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 VPS13CQ709C8 3753 aa0.42□□□□□ -2.34
CHEK2-217ENST00000439346 BOD1L1Q8NFC6 3051 aa0.42□□□□□ -2.34
CHEK2-217ENST00000439346 LAMA2P24043 3122 aaKnown RBP0.41□□□□□ -2.34
CHEK2-217ENST00000439346 HMCN2Q8NDA2 5059 aa0.4□□□□□ -2.35
CHEK2-217ENST00000439346 CSMD2Q7Z408 3487 aa0.4□□□□□ -2.35
CHEK2-217ENST00000439346 DNAH17Q9UFH2 4485 aa0.39□□□□□ -2.35
CHEK2-217ENST00000439346 CEP350Q5VT06 3117 aa0.38□□□□□ -2.35
CHEK2-217ENST00000439346 DYNC1H1Q14204 4646 aaKnown RBP0.38□□□□□ -2.35
CHEK2-217ENST00000439346 MYO9AB2RTY4 2548 aa0.37□□□□□ -2.35
CHEK2-217ENST00000439346 WDFY4Q6ZS81 3184 aa0.37□□□□□ -2.35
CHEK2-217ENST00000439346 LOC400499M0QZD8 3231 aa0.37□□□□□ -2.35
CHEK2-217ENST00000439346 SRCAPQ6ZRS2 3230 aa0.37□□□□□ -2.35
CHEK2-217ENST00000439346 MT1HP80294 61 aa0.36□□□□□ -2.35
CHEK2-217ENST00000439346 LRP2P98164 4655 aa0.35□□□□□ -2.35
CHEK2-217ENST00000439346 DEFB4AO15263 64 aa0.35□□□□□ -2.35
CHEK2-217ENST00000439346 MT1EP04732 61 aa0.35□□□□□ -2.35
CHEK2-217ENST00000439346 HTN3P15516 51 aa0.35□□□□□ -2.35
CHEK2-217ENST00000439346 HERC1Q15751 4861 aa0.35□□□□□ -2.35
CHEK2-217ENST00000439346 MACF1Q9UPN3 7388 aaKnown RBP0.35□□□□□ -2.35
CHEK2-217ENST00000439346 MUC17Q685J3 4493 aa0.34□□□□□ -2.35
CHEK2-217ENST00000439346 STARD9Q9P2P6 4700 aa0.31□□□□□ -2.36
CHEK2-217ENST00000439346 MT1LQ93083 61 aa0.31□□□□□ -2.36
CHEK2-217ENST00000439346 EYSQ5T1H1 3165 aa0.31□□□□□ -2.36
CHEK2-217ENST00000439346 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
CHEK2-217ENST00000439346 CFAP47Q6ZTR5 3102 aa0.3□□□□□ -2.36
CHEK2-217ENST00000439346 SPRR2GQ9BYE4 73 aa0.29□□□□□ -2.36
CHEK2-217ENST00000439346 ASPMQ8IZT6 3477 aa0.29□□□□□ -2.36
CHEK2-217ENST00000439346 USP34Q70CQ2 3546 aa0.29□□□□□ -2.36
CHEK2-217ENST00000439346 FSIP2Q5CZC0 6907 aa0.28□□□□□ -2.36
CHEK2-217ENST00000439346 PCNTO95613 3336 aa0.28□□□□□ -2.36
CHEK2-217ENST00000439346 DNHD1Q96M86 4753 aa0.28□□□□□ -2.36
CHEK2-217ENST00000439346 VPS13AQ96RL7 3174 aa0.27□□□□□ -2.37
CHEK2-217ENST00000439346 MYO15AQ9UKN7 3530 aa0.27□□□□□ -2.37
CHEK2-217ENST00000439346 PCLOQ9Y6V0 5065 aa0.27□□□□□ -2.37
CHEK2-217ENST00000439346 UTRNP46939 3433 aa0.26□□□□□ -2.37
CHEK2-217ENST00000439346 KMT2CQ8NEZ4 4911 aaKnown RBP0.26□□□□□ -2.37
CHEK2-217ENST00000439346 SPEGQ15772 3267 aa0.26□□□□□ -2.37
CHEK2-217ENST00000439346 MT1XP80297 61 aa0.26□□□□□ -2.37
CHEK2-217ENST00000439346 SSPOA2VEC9 5147 aa0.25□□□□□ -2.37
CHEK2-217ENST00000439346 GOLGB1Q14789 3259 aaKnown RBP0.25□□□□□ -2.37
CHEK2-217ENST00000439346 RYR1P21817 5038 aa0.23□□□□□ -2.37
CHEK2-217ENST00000439346 EP400Q96L91 3159 aa0.21□□□□□ -2.38
CHEK2-217ENST00000439346 USH2AO75445 5202 aa0.2□□□□□ -2.38
CHEK2-217ENST00000439346 UBR4Q5T4S7 5183 aa0.2□□□□□ -2.38
CHEK2-217ENST00000439346 KRTAP19-7Q3SYF9 63 aa0.2□□□□□ -2.38
CHEK2-217ENST00000439346 VCANP13611 3396 aa0.2□□□□□ -2.38
CHEK2-217ENST00000439346 UNC80Q8N2C7 3258 aa0.19□□□□□ -2.38
CHEK2-217ENST00000439346 KRTAP19-8Q3LI54 63 aa0.17□□□□□ -2.38
CHEK2-217ENST00000439346 WDFY3Q8IZQ1 3526 aa0.16□□□□□ -2.38
CHEK2-217ENST00000439346 BRCA2P51587 3418 aa0.16□□□□□ -2.38
CHEK2-217ENST00000439346 MT1GP13640 62 aa0.16□□□□□ -2.38
CHEK2-217ENST00000439346 MUC2Q02817 5179 aa0.16□□□□□ -2.38
CHEK2-217ENST00000439346 CENPFP49454 3210 aa0.15□□□□□ -2.38
CHEK2-217ENST00000439346 MUC12Q9UKN1 5478 aa0.14□□□□□ -2.39
CHEK2-217ENST00000439346 MT2AP02795 61 aa0.14□□□□□ -2.39
CHEK2-217ENST00000439346 MT1HL1P0DM35 61 aa0.14□□□□□ -2.39
CHEK2-217ENST00000439346 MT1MQ8N339 61 aa0.13□□□□□ -2.39
CHEK2-217ENST00000439346 BIRC6Q9NR09 4857 aa0.12□□□□□ -2.39
CHEK2-217ENST00000439346 KRTAP6-1Q3LI64 71 aa0.12□□□□□ -2.39
CHEK2-217ENST00000439346 HERC2O95714 4834 aa0.11□□□□□ -2.39
CHEK2-217ENST00000439346 DNAH14Q0VDD8 3507 aa0.08□□□□□ -2.4
CHEK2-217ENST00000439346 RYR3Q15413 4870 aa0.08□□□□□ -2.4
CHEK2-217ENST00000439346 RNF213Q63HN8 5207 aa0.06□□□□□ -2.4
CHEK2-217ENST00000439346 EPPK1P58107 5090 aaKnown RBP0.04□□□□□ -2.4
CHEK2-217ENST00000439346 HYDINQ4G0P3 5121 aa0.03□□□□□ -2.41
CHEK2-217ENST00000439346 MT1BP07438 61 aa0.02□□□□□ -2.41
CHEK2-217ENST00000439346 MT4P47944 62 aa0.02□□□□□ -2.41
CHEK2-217ENST00000439346 DSTQ03001 7570 aaKnown RBP0.01□□□□□ -2.41
CHEK2-217ENST00000439346 CDH23Q9H251 3354 aa0.01□□□□□ -2.41
CHEK2-217ENST00000439346 MT1FP04733 61 aa0□□□□□ -2.41
CHEK2-217ENST00000439346 KRTAP20-2Q3LI61 65 aa0□□□□□ -2.41
CHEK2-217ENST00000439346 RYR2Q92736 4967 aa-0.03□□□□□ -2.41
CHEK2-217ENST00000439346 KIAA1109Q2LD37 5005 aa-0.04□□□□□ -2.42
CHEK2-217ENST00000439346 KRTAP19-2Q3LHN2 52 aa-0.06□□□□□ -2.42
CHEK2-217ENST00000439346 NEBP20929 6669 aa-0.09□□□□□ -2.42
CHEK2-217ENST00000439346 ABCA13Q86UQ4 5058 aa-0.14□□□□□ -2.43
CHEK2-217ENST00000439346 KRTAP20-1Q3LI63 56 aa-0.32□□□□□ -2.46
CHEK2-217ENST00000439346 KRTAP19-6Q3LI70 58 aa-0.34□□□□□ -2.46
Retrieved 78 of 20,778 RNA–protein pairs in 111.6 ms