RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 AEBP2Q6ZN18 517 aaPredicted RBP29.7■■■□□ 2.35
CHEK2-217ENST00000439346 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
CHEK2-217ENST00000439346 SENP3Q9H4L4 574 aaPredicted RBP25.16■■□□□ 1.62
CHEK2-217ENST00000439346 PHF23Q9BUL5 403 aaPredicted RBP24.92■■□□□ 1.58
CHEK2-217ENST00000439346 FOXD1Q16676 465 aa23.59■■□□□ 1.37
CHEK2-217ENST00000439346 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
CHEK2-217ENST00000439346 PPP6R1Q9UPN7 881 aa22.09■■□□□ 1.13
CHEK2-217ENST00000439346 ADRA2BP18089 450 aa22.01■■□□□ 1.11
CHEK2-217ENST00000439346 PIAS4Q8N2W9 510 aaPredicted RBP22.01■■□□□ 1.11
CHEK2-217ENST00000439346 MSH5O43196 834 aa21.93■■□□□ 1.1
CHEK2-217ENST00000439346 POTEDQ86YR6 584 aa21.64■■□□□ 1.05
CHEK2-217ENST00000439346 MAPK8IP2Q13387 824 aaPredicted RBP20.27■□□□□ 0.84
CHEK2-217ENST00000439346 DMRT2Q9Y5R5 561 aa19.98■□□□□ 0.79
CHEK2-217ENST00000439346 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
CHEK2-217ENST00000439346 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
CHEK2-217ENST00000439346 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
CHEK2-217ENST00000439346 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
CHEK2-217ENST00000439346 CNKSR2Q8WXI2 1034 aa19.2■□□□□ 0.66
CHEK2-217ENST00000439346 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
CHEK2-217ENST00000439346 CACNB1Q02641 598 aaPredicted RBP18.96■□□□□ 0.63
CHEK2-217ENST00000439346 RNF39Q9H2S5 420 aa18.79■□□□□ 0.6
CHEK2-217ENST00000439346 NCBP3Q53F19 620 aaKnown RBP18.74■□□□□ 0.59
CHEK2-217ENST00000439346 NPM3O75607 178 aaKnown RBP18.62■□□□□ 0.57
CHEK2-217ENST00000439346 C1QBPQ07021 282 aaKnown RBP18.43■□□□□ 0.54
CHEK2-217ENST00000439346 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
CHEK2-217ENST00000439346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHEK2-217ENST00000439346 KCNA4P22459 653 aa18.28■□□□□ 0.52
CHEK2-217ENST00000439346 U3KPZ7 1027 aaPredicted RBP18■□□□□ 0.47
CHEK2-217ENST00000439346 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
CHEK2-217ENST00000439346 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
CHEK2-217ENST00000439346 CAPN15O75808 1086 aa17.72■□□□□ 0.43
CHEK2-217ENST00000439346 DSG3P32926 999 aa17.61■□□□□ 0.41
CHEK2-217ENST00000439346 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
CHEK2-217ENST00000439346 ABCB7O75027 752 aa17.39■□□□□ 0.37
CHEK2-217ENST00000439346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
CHEK2-217ENST00000439346 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
CHEK2-217ENST00000439346 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
CHEK2-217ENST00000439346 APLP2Q06481 763 aa17.25■□□□□ 0.35
CHEK2-217ENST00000439346 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
CHEK2-217ENST00000439346 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
CHEK2-217ENST00000439346 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
CHEK2-217ENST00000439346 FOXD4L1Q9NU39 408 aa16.96■□□□□ 0.31
CHEK2-217ENST00000439346 POLA2Q14181 598 aa16.94■□□□□ 0.3
CHEK2-217ENST00000439346 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
CHEK2-217ENST00000439346 POTEHQ6S545 545 aa16.92■□□□□ 0.3
CHEK2-217ENST00000439346 ZBTB22O15209 634 aa16.85■□□□□ 0.29
CHEK2-217ENST00000439346 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
CHEK2-217ENST00000439346 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
CHEK2-217ENST00000439346 CHRDL2Q6WN34 429 aa16.44■□□□□ 0.22
CHEK2-217ENST00000439346 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
CHEK2-217ENST00000439346 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
CHEK2-217ENST00000439346 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
CHEK2-217ENST00000439346 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
CHEK2-217ENST00000439346 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
CHEK2-217ENST00000439346 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
CHEK2-217ENST00000439346 FBLN2P98095 1184 aa16.07■□□□□ 0.16
CHEK2-217ENST00000439346 PIP4P2Q8N4L2 257 aa16.07■□□□□ 0.16
CHEK2-217ENST00000439346 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
CHEK2-217ENST00000439346 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
CHEK2-217ENST00000439346 SPDYE2Q495Y8 402 aa15.97■□□□□ 0.15
CHEK2-217ENST00000439346 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
CHEK2-217ENST00000439346 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHEK2-217ENST00000439346 ZNF692Q9BU19 519 aaPredicted RBP15.85■□□□□ 0.13
CHEK2-217ENST00000439346 SP7Q8TDD2 431 aaPredicted RBP15.82■□□□□ 0.12
CHEK2-217ENST00000439346 CLEC11AQ9Y240 323 aa15.82■□□□□ 0.12
CHEK2-217ENST00000439346 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
CHEK2-217ENST00000439346 SSUH2Q9Y2M2 353 aa15.8■□□□□ 0.12
CHEK2-217ENST00000439346 HAX1O00165 279 aa15.79■□□□□ 0.12
CHEK2-217ENST00000439346 SPDYE1Q8NFV5 336 aaPredicted RBP15.72■□□□□ 0.11
CHEK2-217ENST00000439346 EVX2Q03828 476 aa15.7■□□□□ 0.1
CHEK2-217ENST00000439346 PRKAR2AP13861 404 aaKnown RBP15.68■□□□□ 0.1
CHEK2-217ENST00000439346 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHEK2-217ENST00000439346 CHADLQ6NUI6 762 aa15.58■□□□□ 0.08
CHEK2-217ENST00000439346 PRR29P0C7W0 189 aa15.48■□□□□ 0.07
CHEK2-217ENST00000439346 C19orf67A6NJJ6 358 aa15.41■□□□□ 0.06
CHEK2-217ENST00000439346 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
CHEK2-217ENST00000439346 GABBR2O75899 941 aa15.23■□□□□ 0.03
CHEK2-217ENST00000439346 FARP1Q9Y4F1 1045 aaPredicted RBP15.23■□□□□ 0.03
CHEK2-217ENST00000439346 CD44P16070 742 aaKnown RBP15.17■□□□□ 0.02
CHEK2-217ENST00000439346 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
CHEK2-217ENST00000439346 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
CHEK2-217ENST00000439346 POTEIP0CG38 1075 aa14.98□□□□□ -0.01
CHEK2-217ENST00000439346 ZRANB1Q9UGI0 708 aa14.96□□□□□ -0.01
CHEK2-217ENST00000439346 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
CHEK2-217ENST00000439346 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
CHEK2-217ENST00000439346 LHX8Q68G74 356 aa14.85□□□□□ -0.03
CHEK2-217ENST00000439346 PHF12Q96QT6 1004 aa14.82□□□□□ -0.04
CHEK2-217ENST00000439346 GALR2O43603 387 aaPredicted RBP14.81□□□□□ -0.04
CHEK2-217ENST00000439346 PROM2Q8N271 834 aa14.8□□□□□ -0.04
CHEK2-217ENST00000439346 DCBLD2Q96PD2 775 aa14.77□□□□□ -0.05
CHEK2-217ENST00000439346 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
CHEK2-217ENST00000439346 CLCN6P51797 869 aa14.73□□□□□ -0.05
CHEK2-217ENST00000439346 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
CHEK2-217ENST00000439346 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
CHEK2-217ENST00000439346 MS4A3Q96HJ5 214 aa14.58□□□□□ -0.08
CHEK2-217ENST00000439346 PELP1Q8IZL8 1130 aaKnown RBP14.56□□□□□ -0.08
CHEK2-217ENST00000439346 MIER1Q8N108 512 aa14.56□□□□□ -0.08
CHEK2-217ENST00000439346 POTEB2H3BUK9 544 aa14.51□□□□□ -0.09
CHEK2-217ENST00000439346 FKBP8Q14318 412 aa14.5□□□□□ -0.09
CHEK2-217ENST00000439346 CCDC61Q9Y6R9 512 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 416.7 ms