RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 MT1EP04732 61 aa5.23□□□□□ -1.57
DHFR-201ENST00000439211 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
DHFR-201ENST00000439211 MT1GP13640 62 aa5.16□□□□□ -1.58
DHFR-201ENST00000439211 FCGBPQ9Y6R7 5405 aaPredicted RBP5.15□□□□□ -1.58
DHFR-201ENST00000439211 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
DHFR-201ENST00000439211 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
DHFR-201ENST00000439211 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
DHFR-201ENST00000439211 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
DHFR-201ENST00000439211 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
DHFR-201ENST00000439211 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
DHFR-201ENST00000439211 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
DHFR-201ENST00000439211 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
DHFR-201ENST00000439211 MT1MQ8N339 61 aa4.92□□□□□ -1.62
DHFR-201ENST00000439211 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
DHFR-201ENST00000439211 PRM1P04553 51 aa4.88□□□□□ -1.63
DHFR-201ENST00000439211 LCE2DQ5TA82 110 aaPredicted RBP4.85□□□□□ -1.63
DHFR-201ENST00000439211 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
DHFR-201ENST00000439211 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
DHFR-201ENST00000439211 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
DHFR-201ENST00000439211 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
DHFR-201ENST00000439211 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.65
DHFR-201ENST00000439211 MACF1Q9UPN3 7388 aaKnown RBP4.68□□□□□ -1.66
DHFR-201ENST00000439211 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.66
DHFR-201ENST00000439211 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
DHFR-201ENST00000439211 SPRR2EP22531 72 aa4.61□□□□□ -1.67
DHFR-201ENST00000439211 SPRR2BP35325 72 aa4.61□□□□□ -1.67
DHFR-201ENST00000439211 SPRR2AP35326 72 aa4.61□□□□□ -1.67
DHFR-201ENST00000439211 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
DHFR-201ENST00000439211 KRTAP9-6A0A140TA67 174 aa4.53□□□□□ -1.68
DHFR-201ENST00000439211 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
DHFR-201ENST00000439211 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
DHFR-201ENST00000439211 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
DHFR-201ENST00000439211 MT1AP04731 61 aa4.41□□□□□ -1.7
DHFR-201ENST00000439211 SPRR2DP22532 72 aa4.4□□□□□ -1.7
DHFR-201ENST00000439211 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
DHFR-201ENST00000439211 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
DHFR-201ENST00000439211 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
DHFR-201ENST00000439211 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
DHFR-201ENST00000439211 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
DHFR-201ENST00000439211 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
DHFR-201ENST00000439211 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
DHFR-201ENST00000439211 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
DHFR-201ENST00000439211 MT3P25713 68 aa4.11□□□□□ -1.75
DHFR-201ENST00000439211 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
DHFR-201ENST00000439211 MT4P47944 62 aa4.04□□□□□ -1.76
DHFR-201ENST00000439211 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
DHFR-201ENST00000439211 KRTAP4-6Q9BYQ5 205 aa3.76□□□□□ -1.81
DHFR-201ENST00000439211 NEBP20929 6669 aa3.7□□□□□ -1.82
DHFR-201ENST00000439211 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
DHFR-201ENST00000439211 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
DHFR-201ENST00000439211 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
DHFR-201ENST00000439211 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
DHFR-201ENST00000439211 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
DHFR-201ENST00000439211 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
DHFR-201ENST00000439211 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
DHFR-201ENST00000439211 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
DHFR-201ENST00000439211 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
DHFR-201ENST00000439211 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
DHFR-201ENST00000439211 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
DHFR-201ENST00000439211 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
DHFR-201ENST00000439211 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
DHFR-201ENST00000439211 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
DHFR-201ENST00000439211 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
DHFR-201ENST00000439211 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
DHFR-201ENST00000439211 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
DHFR-201ENST00000439211 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
DHFR-201ENST00000439211 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
DHFR-201ENST00000439211 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
DHFR-201ENST00000439211 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
DHFR-201ENST00000439211 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
DHFR-201ENST00000439211 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
DHFR-201ENST00000439211 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
DHFR-201ENST00000439211 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
DHFR-201ENST00000439211 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
DHFR-201ENST00000439211 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
DHFR-201ENST00000439211 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
DHFR-201ENST00000439211 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 132.5 ms