RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 MT1LQ93083 61 aa8.81□□□□□ -1
RAPGEF1-206ENST00000438647 K7ERS5 55 aa8.8□□□□□ -1
RAPGEF1-206ENST00000438647 PSPHP1O15172 72 aa8.79□□□□□ -1
RAPGEF1-206ENST00000438647 MT1MQ8N339 61 aa8.75□□□□□ -1.01
RAPGEF1-206ENST00000438647 KRTAP25-1Q3LHN0 102 aa8.66□□□□□ -1.02
RAPGEF1-206ENST00000438647 KRTAP12-3P60328 96 aa8.64□□□□□ -1.03
RAPGEF1-206ENST00000438647 A6NED7 52 aa8.54□□□□□ -1.04
RAPGEF1-206ENST00000438647 KRTAP4-9Q9BYQ8 210 aa8.49□□□□□ -1.05
RAPGEF1-206ENST00000438647 KRTAP4-3Q9BYR4 195 aa8.48□□□□□ -1.05
RAPGEF1-206ENST00000438647 RPS28P62857 69 aaKnown RBP8.46□□□□□ -1.06
RAPGEF1-206ENST00000438647 LCE4AQ5TA78 99 aa8.42□□□□□ -1.06
RAPGEF1-206ENST00000438647 PCP4P48539 62 aa8.41□□□□□ -1.06
RAPGEF1-206ENST00000438647 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
RAPGEF1-206ENST00000438647 LCE1DQ5T752 114 aa8.34□□□□□ -1.07
RAPGEF1-206ENST00000438647 KRTAP4-7Q9BYR0 210 aa8.33□□□□□ -1.08
RAPGEF1-206ENST00000438647 CDC42SE1Q9NRR8 79 aa8.31□□□□□ -1.08
RAPGEF1-206ENST00000438647 MT4P47944 62 aa8.27□□□□□ -1.09
RAPGEF1-206ENST00000438647 KRTAP5-4Q6L8H1 288 aa8.26□□□□□ -1.09
RAPGEF1-206ENST00000438647 HMCN1Q96RW7 5635 aa8.23□□□□□ -1.09
RAPGEF1-206ENST00000438647 KRTAP19-4Q3LI73 84 aa8.23□□□□□ -1.09
RAPGEF1-206ENST00000438647 GPR98Q8WXG9 6306 aa8.18□□□□□ -1.1
RAPGEF1-206ENST00000438647 ROMO1P60602 79 aa8.16□□□□□ -1.1
RAPGEF1-206ENST00000438647 KRTAP15-1Q3LI76 137 aa8.12□□□□□ -1.11
RAPGEF1-206ENST00000438647 KRTAP4-6Q9BYQ5 205 aa8.03□□□□□ -1.12
RAPGEF1-206ENST00000438647 KRTAP5-5Q701N2 237 aaPredicted RBP8□□□□□ -1.13
RAPGEF1-206ENST00000438647 LCE3CQ5T5A8 94 aa7.95□□□□□ -1.14
RAPGEF1-206ENST00000438647 LOC100996750A0A140TA64 210 aa7.9□□□□□ -1.14
RAPGEF1-206ENST00000438647 AHNAK2Q8IVF2 5795 aa7.88□□□□□ -1.15
RAPGEF1-206ENST00000438647 KRTAP12-4P60329 112 aa7.82□□□□□ -1.16
RAPGEF1-206ENST00000438647 SPRR5A0A1B0GTR4 108 aa7.79□□□□□ -1.16
RAPGEF1-206ENST00000438647 KRTAP20-2Q3LI61 65 aa7.79□□□□□ -1.16
RAPGEF1-206ENST00000438647 SYNE1Q8NF91 8797 aaKnown RBP7.71□□□□□ -1.17
RAPGEF1-206ENST00000438647 KRTAP5-10Q6L8G5 202 aa7.67□□□□□ -1.18
RAPGEF1-206ENST00000438647 KRTAP5-3Q6L8H2 238 aa7.55□□□□□ -1.2
RAPGEF1-206ENST00000438647 MT1AP04731 61 aa7.51□□□□□ -1.21
RAPGEF1-206ENST00000438647 KRTAP9-6A8MVA2 160 aa7.45□□□□□ -1.22
RAPGEF1-206ENST00000438647 BRK1Q8WUW1 75 aa7.44□□□□□ -1.22
RAPGEF1-206ENST00000438647 KRTAP6-1Q3LI64 71 aa7.43□□□□□ -1.22
RAPGEF1-206ENST00000438647 KRTAP5-7Q6L8G8 165 aa7.37□□□□□ -1.23
RAPGEF1-206ENST00000438647 KRTAP5-2Q701N4 177 aa7.26□□□□□ -1.25
RAPGEF1-206ENST00000438647 KRTAP9-4Q9BYQ2 154 aa7.24□□□□□ -1.25
RAPGEF1-206ENST00000438647 KRTAP6-2Q3LI66 62 aa7.08□□□□□ -1.28
RAPGEF1-206ENST00000438647 KRTAP4-11Q9BYQ6 195 aa7.08□□□□□ -1.28
RAPGEF1-206ENST00000438647 PMAIP1Q13794 54 aa7.01□□□□□ -1.29
RAPGEF1-206ENST00000438647 MT3P25713 68 aa6.89□□□□□ -1.31
RAPGEF1-206ENST00000438647 KRTAP5-8O75690 187 aa6.82□□□□□ -1.32
RAPGEF1-206ENST00000438647 OBSCNQ5VST9 7968 aa6.81□□□□□ -1.32
RAPGEF1-206ENST00000438647 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
RAPGEF1-206ENST00000438647 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
RAPGEF1-206ENST00000438647 KRTAP9-9Q9BYP9 154 aa6.49□□□□□ -1.37
RAPGEF1-206ENST00000438647 MUC5BQ9HC84 5762 aaPredicted RBP6.48□□□□□ -1.37
RAPGEF1-206ENST00000438647 KRTAP5-1Q6L8H4 278 aa6.47□□□□□ -1.37
RAPGEF1-206ENST00000438647 AHNAKQ09666 5890 aaKnown RBP6.42□□□□□ -1.38
RAPGEF1-206ENST00000438647 MUC5ACP98088 5654 aa6.4□□□□□ -1.38
RAPGEF1-206ENST00000438647 LCE1EQ5T753 118 aa6.29□□□□□ -1.4
RAPGEF1-206ENST00000438647 KTN1-AS1Q86SY8 53 aa6.26□□□□□ -1.41
RAPGEF1-206ENST00000438647 SVIPQ8NHG7 77 aa6.01□□□□□ -1.45
RAPGEF1-206ENST00000438647 LCE1BQ5T7P3 118 aa5.89□□□□□ -1.47
RAPGEF1-206ENST00000438647 KRTAP4-2Q9BYR5 136 aa5.89□□□□□ -1.47
RAPGEF1-206ENST00000438647 LCE1CQ5T751 118 aa5.83□□□□□ -1.48
RAPGEF1-206ENST00000438647 LCE3DQ9BYE3 92 aa5.78□□□□□ -1.48
RAPGEF1-206ENST00000438647 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
RAPGEF1-206ENST00000438647 KRTAP4-12Q9BQ66 201 aa5.59□□□□□ -1.51
RAPGEF1-206ENST00000438647 H3BS24 57 aa5.58□□□□□ -1.52
RAPGEF1-206ENST00000438647 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
RAPGEF1-206ENST00000438647 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.33□□□□□ -1.56
RAPGEF1-206ENST00000438647 KRTAP5-11Q6L8G4 156 aa5.27□□□□□ -1.57
RAPGEF1-206ENST00000438647 LCE1FQ5T754 118 aa5.12□□□□□ -1.59
RAPGEF1-206ENST00000438647 KRTAP21-2Q3LI59 83 aa4.89□□□□□ -1.63
RAPGEF1-206ENST00000438647 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
RAPGEF1-206ENST00000438647 PHGR1C9JFL3 82 aa4.54□□□□□ -1.68
RAPGEF1-206ENST00000438647 KRTAP4-4Q9BYR3 166 aa4.43□□□□□ -1.7
RAPGEF1-206ENST00000438647 MUC19Q7Z5P9 8384 aa4.2□□□□□ -1.74
RAPGEF1-206ENST00000438647 PRM1P04553 51 aa4.16□□□□□ -1.74
RAPGEF1-206ENST00000438647 INE1O15225 51 aa3.74□□□□□ -1.81
RAPGEF1-206ENST00000438647 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
RAPGEF1-206ENST00000438647 KRTAP21-1Q3LI58 79 aa3.42□□□□□ -1.86
RAPGEF1-206ENST00000438647 MUC16Q8WXI7 14507 aa2.96□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms