RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
HCG18-236ENST00000438412 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
HCG18-236ENST00000438412 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
HCG18-236ENST00000438412 MT1EP04732 61 aa4.46□□□□□ -1.7
HCG18-236ENST00000438412 MT1LQ93083 61 aa4.44□□□□□ -1.7
HCG18-236ENST00000438412 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
HCG18-236ENST00000438412 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
HCG18-236ENST00000438412 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
HCG18-236ENST00000438412 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
HCG18-236ENST00000438412 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
HCG18-236ENST00000438412 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
HCG18-236ENST00000438412 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
HCG18-236ENST00000438412 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
HCG18-236ENST00000438412 MT1GP13640 62 aa4.22□□□□□ -1.73
HCG18-236ENST00000438412 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
HCG18-236ENST00000438412 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
HCG18-236ENST00000438412 MT1MQ8N339 61 aa4.18□□□□□ -1.74
HCG18-236ENST00000438412 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
HCG18-236ENST00000438412 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
HCG18-236ENST00000438412 KRTAP2-3P0C7H8 128 aa4.15□□□□□ -1.75
HCG18-236ENST00000438412 KRTAP2-4Q9BYR9 128 aa4.15□□□□□ -1.75
HCG18-236ENST00000438412 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.75
HCG18-236ENST00000438412 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
HCG18-236ENST00000438412 INE1O15225 51 aa4.06□□□□□ -1.76
HCG18-236ENST00000438412 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
HCG18-236ENST00000438412 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
HCG18-236ENST00000438412 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
HCG18-236ENST00000438412 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
HCG18-236ENST00000438412 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
HCG18-236ENST00000438412 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
HCG18-236ENST00000438412 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
HCG18-236ENST00000438412 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
HCG18-236ENST00000438412 SPRR2EP22531 72 aa3.82□□□□□ -1.8
HCG18-236ENST00000438412 SPRR2BP35325 72 aa3.82□□□□□ -1.8
HCG18-236ENST00000438412 SPRR2AP35326 72 aa3.82□□□□□ -1.8
HCG18-236ENST00000438412 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
HCG18-236ENST00000438412 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
HCG18-236ENST00000438412 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
HCG18-236ENST00000438412 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
HCG18-236ENST00000438412 MT1AP04731 61 aa3.67□□□□□ -1.82
HCG18-236ENST00000438412 SPRR2DP22532 72 aa3.64□□□□□ -1.83
HCG18-236ENST00000438412 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
HCG18-236ENST00000438412 NEBP20929 6669 aa3.51□□□□□ -1.85
HCG18-236ENST00000438412 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
HCG18-236ENST00000438412 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
HCG18-236ENST00000438412 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
HCG18-236ENST00000438412 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
HCG18-236ENST00000438412 MT4P47944 62 aa3.31□□□□□ -1.88
HCG18-236ENST00000438412 PRM1P04553 51 aa3.28□□□□□ -1.88
HCG18-236ENST00000438412 MT3P25713 68 aa3.28□□□□□ -1.88
HCG18-236ENST00000438412 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.89
HCG18-236ENST00000438412 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
HCG18-236ENST00000438412 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
HCG18-236ENST00000438412 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
HCG18-236ENST00000438412 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
HCG18-236ENST00000438412 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
HCG18-236ENST00000438412 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
HCG18-236ENST00000438412 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
HCG18-236ENST00000438412 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
HCG18-236ENST00000438412 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
HCG18-236ENST00000438412 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
HCG18-236ENST00000438412 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
HCG18-236ENST00000438412 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
HCG18-236ENST00000438412 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
HCG18-236ENST00000438412 LCE1CQ5T751 118 aa2.55□□□□□ -2
HCG18-236ENST00000438412 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
HCG18-236ENST00000438412 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
HCG18-236ENST00000438412 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
HCG18-236ENST00000438412 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
HCG18-236ENST00000438412 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
HCG18-236ENST00000438412 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
HCG18-236ENST00000438412 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
HCG18-236ENST00000438412 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
HCG18-236ENST00000438412 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
HCG18-236ENST00000438412 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
HCG18-236ENST00000438412 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
HCG18-236ENST00000438412 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 358.7 ms