RNA–Protein interactions for RNA: ENST00000438015.5

CHEK1-204, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHEK1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-204ENST00000438015 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
CHEK1-204ENST00000438015 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
CHEK1-204ENST00000438015 LCE2DQ5TA82 110 aaPredicted RBP3.65□□□□□ -1.82
CHEK1-204ENST00000438015 MT1LQ93083 61 aa3.63□□□□□ -1.83
CHEK1-204ENST00000438015 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
CHEK1-204ENST00000438015 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
CHEK1-204ENST00000438015 MT1EP04732 61 aa3.57□□□□□ -1.84
CHEK1-204ENST00000438015 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
CHEK1-204ENST00000438015 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
CHEK1-204ENST00000438015 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
CHEK1-204ENST00000438015 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
CHEK1-204ENST00000438015 SSPOA2VEC9 5147 aa3.45□□□□□ -1.86
CHEK1-204ENST00000438015 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
CHEK1-204ENST00000438015 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
CHEK1-204ENST00000438015 KRTAP9-2Q9BYQ4 174 aa3.39□□□□□ -1.87
CHEK1-204ENST00000438015 MT1MQ8N339 61 aa3.38□□□□□ -1.87
CHEK1-204ENST00000438015 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
CHEK1-204ENST00000438015 PRM1P04553 51 aa3.32□□□□□ -1.88
CHEK1-204ENST00000438015 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
CHEK1-204ENST00000438015 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
CHEK1-204ENST00000438015 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
CHEK1-204ENST00000438015 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
CHEK1-204ENST00000438015 KRTAP9-6A0A140TA67 174 aa3.23□□□□□ -1.89
CHEK1-204ENST00000438015 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
CHEK1-204ENST00000438015 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
CHEK1-204ENST00000438015 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
CHEK1-204ENST00000438015 SPRR2EP22531 72 aa3.17□□□□□ -1.9
CHEK1-204ENST00000438015 SPRR2BP35325 72 aa3.17□□□□□ -1.9
CHEK1-204ENST00000438015 SPRR2AP35326 72 aa3.17□□□□□ -1.9
CHEK1-204ENST00000438015 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
CHEK1-204ENST00000438015 LCE5AQ5TCM9 118 aa3.04□□□□□ -1.92
CHEK1-204ENST00000438015 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
CHEK1-204ENST00000438015 MT1AP04731 61 aa3.01□□□□□ -1.93
CHEK1-204ENST00000438015 SPRR2DP22532 72 aa3□□□□□ -1.93
CHEK1-204ENST00000438015 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
CHEK1-204ENST00000438015 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
CHEK1-204ENST00000438015 MT3P25713 68 aa2.89□□□□□ -1.95
CHEK1-204ENST00000438015 MT4P47944 62 aa2.89□□□□□ -1.95
CHEK1-204ENST00000438015 LCE1AQ5T7P2 110 aa2.87□□□□□ -1.95
CHEK1-204ENST00000438015 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
CHEK1-204ENST00000438015 KRTAP9-4Q9BYQ2 154 aa2.8□□□□□ -1.96
CHEK1-204ENST00000438015 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
CHEK1-204ENST00000438015 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
CHEK1-204ENST00000438015 KRTAP2-2Q9BYT5 123 aa2.75□□□□□ -1.97
CHEK1-204ENST00000438015 NEBP20929 6669 aa2.7□□□□□ -1.98
CHEK1-204ENST00000438015 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
CHEK1-204ENST00000438015 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
CHEK1-204ENST00000438015 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
CHEK1-204ENST00000438015 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
CHEK1-204ENST00000438015 KRTAP5-9P26371 169 aa2.55□□□□□ -2
CHEK1-204ENST00000438015 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
CHEK1-204ENST00000438015 KRTAP9-9Q9BYP9 154 aa2.43□□□□□ -2.02
CHEK1-204ENST00000438015 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
CHEK1-204ENST00000438015 LCE4AQ5TA78 99 aa2.43□□□□□ -2.02
CHEK1-204ENST00000438015 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
CHEK1-204ENST00000438015 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
CHEK1-204ENST00000438015 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
CHEK1-204ENST00000438015 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
CHEK1-204ENST00000438015 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
CHEK1-204ENST00000438015 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
CHEK1-204ENST00000438015 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
CHEK1-204ENST00000438015 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.08
CHEK1-204ENST00000438015 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
CHEK1-204ENST00000438015 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
CHEK1-204ENST00000438015 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
CHEK1-204ENST00000438015 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
CHEK1-204ENST00000438015 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
CHEK1-204ENST00000438015 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
CHEK1-204ENST00000438015 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
CHEK1-204ENST00000438015 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CHEK1-204ENST00000438015 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
CHEK1-204ENST00000438015 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
CHEK1-204ENST00000438015 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
CHEK1-204ENST00000438015 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
CHEK1-204ENST00000438015 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
CHEK1-204ENST00000438015 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
CHEK1-204ENST00000438015 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms