RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
RFTN1-203ENST00000432519 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
RFTN1-203ENST00000432519 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
RFTN1-203ENST00000432519 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.62
RFTN1-203ENST00000432519 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
RFTN1-203ENST00000432519 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
RFTN1-203ENST00000432519 MT1MQ8N339 61 aa4.86□□□□□ -1.63
RFTN1-203ENST00000432519 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
RFTN1-203ENST00000432519 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
RFTN1-203ENST00000432519 MT1GP13640 62 aa4.83□□□□□ -1.64
RFTN1-203ENST00000432519 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
RFTN1-203ENST00000432519 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
RFTN1-203ENST00000432519 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
RFTN1-203ENST00000432519 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
RFTN1-203ENST00000432519 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
RFTN1-203ENST00000432519 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
RFTN1-203ENST00000432519 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
RFTN1-203ENST00000432519 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
RFTN1-203ENST00000432519 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
RFTN1-203ENST00000432519 SPRR2EP22531 72 aa4.45□□□□□ -1.7
RFTN1-203ENST00000432519 SPRR2BP35325 72 aa4.45□□□□□ -1.7
RFTN1-203ENST00000432519 SPRR2AP35326 72 aa4.45□□□□□ -1.7
RFTN1-203ENST00000432519 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
RFTN1-203ENST00000432519 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
RFTN1-203ENST00000432519 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.71
RFTN1-203ENST00000432519 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
RFTN1-203ENST00000432519 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
RFTN1-203ENST00000432519 MT1AP04731 61 aa4.29□□□□□ -1.72
RFTN1-203ENST00000432519 SPRR2DP22532 72 aa4.26□□□□□ -1.73
RFTN1-203ENST00000432519 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
RFTN1-203ENST00000432519 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
RFTN1-203ENST00000432519 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
RFTN1-203ENST00000432519 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
RFTN1-203ENST00000432519 NEBP20929 6669 aa4.09□□□□□ -1.76
RFTN1-203ENST00000432519 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
RFTN1-203ENST00000432519 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
RFTN1-203ENST00000432519 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
RFTN1-203ENST00000432519 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
RFTN1-203ENST00000432519 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
RFTN1-203ENST00000432519 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
RFTN1-203ENST00000432519 MT3P25713 68 aa3.85□□□□□ -1.79
RFTN1-203ENST00000432519 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
RFTN1-203ENST00000432519 MT4P47944 62 aa3.8□□□□□ -1.8
RFTN1-203ENST00000432519 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
RFTN1-203ENST00000432519 PRM1P04553 51 aa3.7□□□□□ -1.82
RFTN1-203ENST00000432519 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
RFTN1-203ENST00000432519 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
RFTN1-203ENST00000432519 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
RFTN1-203ENST00000432519 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
RFTN1-203ENST00000432519 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
RFTN1-203ENST00000432519 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
RFTN1-203ENST00000432519 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
RFTN1-203ENST00000432519 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
RFTN1-203ENST00000432519 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
RFTN1-203ENST00000432519 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
RFTN1-203ENST00000432519 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
RFTN1-203ENST00000432519 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
RFTN1-203ENST00000432519 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
RFTN1-203ENST00000432519 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
RFTN1-203ENST00000432519 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
RFTN1-203ENST00000432519 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
RFTN1-203ENST00000432519 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
RFTN1-203ENST00000432519 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
RFTN1-203ENST00000432519 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
RFTN1-203ENST00000432519 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
RFTN1-203ENST00000432519 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
RFTN1-203ENST00000432519 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
RFTN1-203ENST00000432519 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
RFTN1-203ENST00000432519 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.98
RFTN1-203ENST00000432519 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
RFTN1-203ENST00000432519 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
RFTN1-203ENST00000432519 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
RFTN1-203ENST00000432519 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
RFTN1-203ENST00000432519 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
RFTN1-203ENST00000432519 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
RFTN1-203ENST00000432519 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
RFTN1-203ENST00000432519 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 96.2 ms