RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
LINC00840-201ENST00000431737 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
LINC00840-201ENST00000431737 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
LINC00840-201ENST00000431737 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
LINC00840-201ENST00000431737 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
LINC00840-201ENST00000431737 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
LINC00840-201ENST00000431737 MT1GP13640 62 aa4.28□□□□□ -1.72
LINC00840-201ENST00000431737 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
LINC00840-201ENST00000431737 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
LINC00840-201ENST00000431737 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
LINC00840-201ENST00000431737 MT1MQ8N339 61 aa4.25□□□□□ -1.73
LINC00840-201ENST00000431737 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
LINC00840-201ENST00000431737 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
LINC00840-201ENST00000431737 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
LINC00840-201ENST00000431737 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
LINC00840-201ENST00000431737 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
LINC00840-201ENST00000431737 KRTAP2-3P0C7H8 128 aa4.14□□□□□ -1.75
LINC00840-201ENST00000431737 KRTAP2-4Q9BYR9 128 aa4.14□□□□□ -1.75
LINC00840-201ENST00000431737 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
LINC00840-201ENST00000431737 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
LINC00840-201ENST00000431737 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
LINC00840-201ENST00000431737 INE1O15225 51 aa4.08□□□□□ -1.76
LINC00840-201ENST00000431737 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
LINC00840-201ENST00000431737 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
LINC00840-201ENST00000431737 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
LINC00840-201ENST00000431737 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
LINC00840-201ENST00000431737 LCE1DQ5T752 114 aa4□□□□□ -1.77
LINC00840-201ENST00000431737 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
LINC00840-201ENST00000431737 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
LINC00840-201ENST00000431737 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
LINC00840-201ENST00000431737 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
LINC00840-201ENST00000431737 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
LINC00840-201ENST00000431737 SPRR2EP22531 72 aa3.94□□□□□ -1.78
LINC00840-201ENST00000431737 SPRR2BP35325 72 aa3.94□□□□□ -1.78
LINC00840-201ENST00000431737 SPRR2AP35326 72 aa3.94□□□□□ -1.78
LINC00840-201ENST00000431737 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
LINC00840-201ENST00000431737 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
LINC00840-201ENST00000431737 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
LINC00840-201ENST00000431737 MT3P25713 68 aa3.83□□□□□ -1.8
LINC00840-201ENST00000431737 MT1AP04731 61 aa3.81□□□□□ -1.8
LINC00840-201ENST00000431737 SPRR2DP22532 72 aa3.8□□□□□ -1.8
LINC00840-201ENST00000431737 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
LINC00840-201ENST00000431737 NEBP20929 6669 aa3.7□□□□□ -1.82
LINC00840-201ENST00000431737 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
LINC00840-201ENST00000431737 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
LINC00840-201ENST00000431737 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
LINC00840-201ENST00000431737 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
LINC00840-201ENST00000431737 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
LINC00840-201ENST00000431737 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
LINC00840-201ENST00000431737 LCE1EQ5T753 118 aa3.4□□□□□ -1.86
LINC00840-201ENST00000431737 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
LINC00840-201ENST00000431737 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
LINC00840-201ENST00000431737 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
LINC00840-201ENST00000431737 MT4P47944 62 aa3.26□□□□□ -1.89
LINC00840-201ENST00000431737 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
LINC00840-201ENST00000431737 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
LINC00840-201ENST00000431737 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
LINC00840-201ENST00000431737 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
LINC00840-201ENST00000431737 PRM1P04553 51 aa3.05□□□□□ -1.92
LINC00840-201ENST00000431737 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
LINC00840-201ENST00000431737 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
LINC00840-201ENST00000431737 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
LINC00840-201ENST00000431737 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
LINC00840-201ENST00000431737 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
LINC00840-201ENST00000431737 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
LINC00840-201ENST00000431737 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
LINC00840-201ENST00000431737 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
LINC00840-201ENST00000431737 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
LINC00840-201ENST00000431737 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
LINC00840-201ENST00000431737 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
LINC00840-201ENST00000431737 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
LINC00840-201ENST00000431737 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
LINC00840-201ENST00000431737 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
LINC00840-201ENST00000431737 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
LINC00840-201ENST00000431737 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
LINC00840-201ENST00000431737 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
LINC00840-201ENST00000431737 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 56.1 ms