RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
RBM39-212ENST00000429968 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
RBM39-212ENST00000429968 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
RBM39-212ENST00000429968 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
RBM39-212ENST00000429968 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
RBM39-212ENST00000429968 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
RBM39-212ENST00000429968 MACF1Q9UPN3 7388 aaKnown RBP4.66□□□□□ -1.66
RBM39-212ENST00000429968 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
RBM39-212ENST00000429968 MT1MQ8N339 61 aa4.63□□□□□ -1.67
RBM39-212ENST00000429968 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
RBM39-212ENST00000429968 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
RBM39-212ENST00000429968 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
RBM39-212ENST00000429968 MT1GP13640 62 aa4.58□□□□□ -1.68
RBM39-212ENST00000429968 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
RBM39-212ENST00000429968 KRTAP9-2Q9BYQ4 174 aa4.56□□□□□ -1.68
RBM39-212ENST00000429968 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
RBM39-212ENST00000429968 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
RBM39-212ENST00000429968 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
RBM39-212ENST00000429968 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
RBM39-212ENST00000429968 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
RBM39-212ENST00000429968 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
RBM39-212ENST00000429968 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
RBM39-212ENST00000429968 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
RBM39-212ENST00000429968 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
RBM39-212ENST00000429968 KRTAP5-9P26371 169 aa4.34□□□□□ -1.71
RBM39-212ENST00000429968 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
RBM39-212ENST00000429968 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
RBM39-212ENST00000429968 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
RBM39-212ENST00000429968 MT3P25713 68 aa4.25□□□□□ -1.73
RBM39-212ENST00000429968 SPRR2EP22531 72 aa4.21□□□□□ -1.74
RBM39-212ENST00000429968 SPRR2BP35325 72 aa4.21□□□□□ -1.74
RBM39-212ENST00000429968 SPRR2AP35326 72 aa4.21□□□□□ -1.74
RBM39-212ENST00000429968 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
RBM39-212ENST00000429968 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
RBM39-212ENST00000429968 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
RBM39-212ENST00000429968 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
RBM39-212ENST00000429968 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
RBM39-212ENST00000429968 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
RBM39-212ENST00000429968 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
RBM39-212ENST00000429968 MT1AP04731 61 aa4.09□□□□□ -1.76
RBM39-212ENST00000429968 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
RBM39-212ENST00000429968 SPRR2DP22532 72 aa4.03□□□□□ -1.76
RBM39-212ENST00000429968 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
RBM39-212ENST00000429968 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
RBM39-212ENST00000429968 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
RBM39-212ENST00000429968 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
RBM39-212ENST00000429968 NEBP20929 6669 aa3.8□□□□□ -1.8
RBM39-212ENST00000429968 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
RBM39-212ENST00000429968 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
RBM39-212ENST00000429968 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
RBM39-212ENST00000429968 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
RBM39-212ENST00000429968 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
RBM39-212ENST00000429968 MT4P47944 62 aa3.59□□□□□ -1.84
RBM39-212ENST00000429968 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
RBM39-212ENST00000429968 PRM1P04553 51 aa3.54□□□□□ -1.84
RBM39-212ENST00000429968 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
RBM39-212ENST00000429968 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
RBM39-212ENST00000429968 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
RBM39-212ENST00000429968 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
RBM39-212ENST00000429968 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
RBM39-212ENST00000429968 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
RBM39-212ENST00000429968 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
RBM39-212ENST00000429968 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
RBM39-212ENST00000429968 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
RBM39-212ENST00000429968 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
RBM39-212ENST00000429968 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
RBM39-212ENST00000429968 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
RBM39-212ENST00000429968 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
RBM39-212ENST00000429968 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
RBM39-212ENST00000429968 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
RBM39-212ENST00000429968 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
RBM39-212ENST00000429968 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
RBM39-212ENST00000429968 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
RBM39-212ENST00000429968 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
RBM39-212ENST00000429968 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
RBM39-212ENST00000429968 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
RBM39-212ENST00000429968 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
RBM39-212ENST00000429968 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 10 ms