RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
SNRNP200-202ENST00000429650 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
SNRNP200-202ENST00000429650 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
SNRNP200-202ENST00000429650 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
SNRNP200-202ENST00000429650 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
SNRNP200-202ENST00000429650 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
SNRNP200-202ENST00000429650 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
SNRNP200-202ENST00000429650 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
SNRNP200-202ENST00000429650 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
SNRNP200-202ENST00000429650 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
SNRNP200-202ENST00000429650 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
SNRNP200-202ENST00000429650 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
SNRNP200-202ENST00000429650 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
SNRNP200-202ENST00000429650 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
SNRNP200-202ENST00000429650 MT1MQ8N339 61 aa4.31□□□□□ -1.72
SNRNP200-202ENST00000429650 MT1GP13640 62 aa4.3□□□□□ -1.72
SNRNP200-202ENST00000429650 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
SNRNP200-202ENST00000429650 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
SNRNP200-202ENST00000429650 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
SNRNP200-202ENST00000429650 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
SNRNP200-202ENST00000429650 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
SNRNP200-202ENST00000429650 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
SNRNP200-202ENST00000429650 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
SNRNP200-202ENST00000429650 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
SNRNP200-202ENST00000429650 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
SNRNP200-202ENST00000429650 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
SNRNP200-202ENST00000429650 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
SNRNP200-202ENST00000429650 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
SNRNP200-202ENST00000429650 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
SNRNP200-202ENST00000429650 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
SNRNP200-202ENST00000429650 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
SNRNP200-202ENST00000429650 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
SNRNP200-202ENST00000429650 MT1AP04731 61 aa3.88□□□□□ -1.79
SNRNP200-202ENST00000429650 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
SNRNP200-202ENST00000429650 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
SNRNP200-202ENST00000429650 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
SNRNP200-202ENST00000429650 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
SNRNP200-202ENST00000429650 SPRR2EP22531 72 aa3.77□□□□□ -1.81
SNRNP200-202ENST00000429650 SPRR2BP35325 72 aa3.77□□□□□ -1.81
SNRNP200-202ENST00000429650 SPRR2AP35326 72 aa3.77□□□□□ -1.81
SNRNP200-202ENST00000429650 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
SNRNP200-202ENST00000429650 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
SNRNP200-202ENST00000429650 SPRR2DP22532 72 aa3.59□□□□□ -1.83
SNRNP200-202ENST00000429650 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
SNRNP200-202ENST00000429650 PRM1P04553 51 aa3.55□□□□□ -1.84
SNRNP200-202ENST00000429650 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
SNRNP200-202ENST00000429650 NEBP20929 6669 aa3.52□□□□□ -1.85
SNRNP200-202ENST00000429650 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
SNRNP200-202ENST00000429650 MT3P25713 68 aa3.49□□□□□ -1.85
SNRNP200-202ENST00000429650 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
SNRNP200-202ENST00000429650 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
SNRNP200-202ENST00000429650 MT4P47944 62 aa3.3□□□□□ -1.88
SNRNP200-202ENST00000429650 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
SNRNP200-202ENST00000429650 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
SNRNP200-202ENST00000429650 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
SNRNP200-202ENST00000429650 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
SNRNP200-202ENST00000429650 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
SNRNP200-202ENST00000429650 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
SNRNP200-202ENST00000429650 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
SNRNP200-202ENST00000429650 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
SNRNP200-202ENST00000429650 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
SNRNP200-202ENST00000429650 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
SNRNP200-202ENST00000429650 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
SNRNP200-202ENST00000429650 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SNRNP200-202ENST00000429650 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
SNRNP200-202ENST00000429650 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
SNRNP200-202ENST00000429650 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
SNRNP200-202ENST00000429650 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.98
SNRNP200-202ENST00000429650 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
SNRNP200-202ENST00000429650 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
SNRNP200-202ENST00000429650 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
SNRNP200-202ENST00000429650 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SNRNP200-202ENST00000429650 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
SNRNP200-202ENST00000429650 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
SNRNP200-202ENST00000429650 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
SNRNP200-202ENST00000429650 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
SNRNP200-202ENST00000429650 PHGR1C9JFL3 82 aa2□□□□□ -2.09
SNRNP200-202ENST00000429650 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms