RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 LCE2AQ5TA79 106 aaPredicted RBP4.59□□□□□ -1.67
SGMS1-203ENST00000429490 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.68
SGMS1-203ENST00000429490 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
SGMS1-203ENST00000429490 MT1EP04732 61 aa4.57□□□□□ -1.68
SGMS1-203ENST00000429490 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
SGMS1-203ENST00000429490 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
SGMS1-203ENST00000429490 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
SGMS1-203ENST00000429490 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
SGMS1-203ENST00000429490 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
SGMS1-203ENST00000429490 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
SGMS1-203ENST00000429490 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.69
SGMS1-203ENST00000429490 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
SGMS1-203ENST00000429490 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
SGMS1-203ENST00000429490 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
SGMS1-203ENST00000429490 MT1MQ8N339 61 aa4.32□□□□□ -1.72
SGMS1-203ENST00000429490 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
SGMS1-203ENST00000429490 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
SGMS1-203ENST00000429490 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.73
SGMS1-203ENST00000429490 LCE2DQ5TA82 110 aaPredicted RBP4.19□□□□□ -1.74
SGMS1-203ENST00000429490 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
SGMS1-203ENST00000429490 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
SGMS1-203ENST00000429490 KRTAP9-2Q9BYQ4 174 aa4.01□□□□□ -1.77
SGMS1-203ENST00000429490 PRM1P04553 51 aa4.01□□□□□ -1.77
SGMS1-203ENST00000429490 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
SGMS1-203ENST00000429490 SPRR2EP22531 72 aa3.98□□□□□ -1.77
SGMS1-203ENST00000429490 SPRR2BP35325 72 aa3.98□□□□□ -1.77
SGMS1-203ENST00000429490 SPRR2AP35326 72 aa3.98□□□□□ -1.77
SGMS1-203ENST00000429490 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.77
SGMS1-203ENST00000429490 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
SGMS1-203ENST00000429490 MT1AP04731 61 aa3.86□□□□□ -1.79
SGMS1-203ENST00000429490 SPRR2DP22532 72 aa3.78□□□□□ -1.8
SGMS1-203ENST00000429490 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
SGMS1-203ENST00000429490 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
SGMS1-203ENST00000429490 MT3P25713 68 aa3.65□□□□□ -1.82
SGMS1-203ENST00000429490 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
SGMS1-203ENST00000429490 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
SGMS1-203ENST00000429490 MT4P47944 62 aa3.53□□□□□ -1.84
SGMS1-203ENST00000429490 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
SGMS1-203ENST00000429490 KRTAP9-6A0A140TA67 174 aa3.49□□□□□ -1.85
SGMS1-203ENST00000429490 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
SGMS1-203ENST00000429490 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
SGMS1-203ENST00000429490 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
SGMS1-203ENST00000429490 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
SGMS1-203ENST00000429490 NEBP20929 6669 aa3.34□□□□□ -1.87
SGMS1-203ENST00000429490 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
SGMS1-203ENST00000429490 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
SGMS1-203ENST00000429490 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
SGMS1-203ENST00000429490 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
SGMS1-203ENST00000429490 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
SGMS1-203ENST00000429490 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
SGMS1-203ENST00000429490 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
SGMS1-203ENST00000429490 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
SGMS1-203ENST00000429490 LCE4AQ5TA78 99 aa2.94□□□□□ -1.94
SGMS1-203ENST00000429490 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
SGMS1-203ENST00000429490 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
SGMS1-203ENST00000429490 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
SGMS1-203ENST00000429490 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
SGMS1-203ENST00000429490 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
SGMS1-203ENST00000429490 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
SGMS1-203ENST00000429490 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
SGMS1-203ENST00000429490 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
SGMS1-203ENST00000429490 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
SGMS1-203ENST00000429490 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
SGMS1-203ENST00000429490 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
SGMS1-203ENST00000429490 LCE1FQ5T754 118 aa2.4□□□□□ -2.02
SGMS1-203ENST00000429490 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
SGMS1-203ENST00000429490 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
SGMS1-203ENST00000429490 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
SGMS1-203ENST00000429490 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
SGMS1-203ENST00000429490 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
SGMS1-203ENST00000429490 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
SGMS1-203ENST00000429490 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
SGMS1-203ENST00000429490 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
SGMS1-203ENST00000429490 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
SGMS1-203ENST00000429490 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
SGMS1-203ENST00000429490 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
SGMS1-203ENST00000429490 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 105.6 ms