RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
PDE6B-202ENST00000429163 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
PDE6B-202ENST00000429163 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
PDE6B-202ENST00000429163 KRTAP2-1Q9BYU5 128 aa6.34□□□□□ -1.39
PDE6B-202ENST00000429163 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
PDE6B-202ENST00000429163 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
PDE6B-202ENST00000429163 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
PDE6B-202ENST00000429163 MT1GP13640 62 aa6.17□□□□□ -1.42
PDE6B-202ENST00000429163 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
PDE6B-202ENST00000429163 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
PDE6B-202ENST00000429163 KRTAP9-7A8MTY7 169 aa6.08□□□□□ -1.44
PDE6B-202ENST00000429163 MT1MQ8N339 61 aa6.08□□□□□ -1.44
PDE6B-202ENST00000429163 KRTAP6-3Q3LI67 103 aa6□□□□□ -1.45
PDE6B-202ENST00000429163 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
PDE6B-202ENST00000429163 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
PDE6B-202ENST00000429163 KRTAP5-9P26371 169 aa5.92□□□□□ -1.46
PDE6B-202ENST00000429163 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
PDE6B-202ENST00000429163 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
PDE6B-202ENST00000429163 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
PDE6B-202ENST00000429163 MDN1Q9NU22 5596 aa5.73□□□□□ -1.49
PDE6B-202ENST00000429163 NEBP20929 6669 aa5.71□□□□□ -1.5
PDE6B-202ENST00000429163 SPRR2EP22531 72 aa5.66□□□□□ -1.5
PDE6B-202ENST00000429163 SPRR2BP35325 72 aa5.66□□□□□ -1.5
PDE6B-202ENST00000429163 SPRR2AP35326 72 aa5.66□□□□□ -1.5
PDE6B-202ENST00000429163 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
PDE6B-202ENST00000429163 MT1AP04731 61 aa5.53□□□□□ -1.52
PDE6B-202ENST00000429163 KRTAP12-4P60329 112 aa5.48□□□□□ -1.53
PDE6B-202ENST00000429163 SPRR2DP22532 72 aa5.46□□□□□ -1.54
PDE6B-202ENST00000429163 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
PDE6B-202ENST00000429163 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
PDE6B-202ENST00000429163 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
PDE6B-202ENST00000429163 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.55
PDE6B-202ENST00000429163 KRTAP20-1Q3LI63 56 aa5.36□□□□□ -1.55
PDE6B-202ENST00000429163 LCE3DQ9BYE3 92 aa5.24□□□□□ -1.57
PDE6B-202ENST00000429163 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
PDE6B-202ENST00000429163 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
PDE6B-202ENST00000429163 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
PDE6B-202ENST00000429163 KRTAP2-2Q9BYT5 123 aa5.18□□□□□ -1.58
PDE6B-202ENST00000429163 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
PDE6B-202ENST00000429163 MT3P25713 68 aa4.99□□□□□ -1.61
PDE6B-202ENST00000429163 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
PDE6B-202ENST00000429163 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
PDE6B-202ENST00000429163 LCE4AQ5TA78 99 aa4.84□□□□□ -1.64
PDE6B-202ENST00000429163 PRM1P04553 51 aa4.79□□□□□ -1.64
PDE6B-202ENST00000429163 MT4P47944 62 aa4.75□□□□□ -1.65
PDE6B-202ENST00000429163 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
PDE6B-202ENST00000429163 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
PDE6B-202ENST00000429163 HMCN1Q96RW7 5635 aa4.67□□□□□ -1.66
PDE6B-202ENST00000429163 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
PDE6B-202ENST00000429163 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
PDE6B-202ENST00000429163 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.69
PDE6B-202ENST00000429163 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
PDE6B-202ENST00000429163 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
PDE6B-202ENST00000429163 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
PDE6B-202ENST00000429163 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
PDE6B-202ENST00000429163 KRTAP5-10Q6L8G5 202 aa4.19□□□□□ -1.74
PDE6B-202ENST00000429163 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
PDE6B-202ENST00000429163 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
PDE6B-202ENST00000429163 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
PDE6B-202ENST00000429163 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
PDE6B-202ENST00000429163 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
PDE6B-202ENST00000429163 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
PDE6B-202ENST00000429163 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
PDE6B-202ENST00000429163 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
PDE6B-202ENST00000429163 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
PDE6B-202ENST00000429163 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
PDE6B-202ENST00000429163 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
PDE6B-202ENST00000429163 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
PDE6B-202ENST00000429163 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
PDE6B-202ENST00000429163 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
PDE6B-202ENST00000429163 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
PDE6B-202ENST00000429163 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
PDE6B-202ENST00000429163 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
PDE6B-202ENST00000429163 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
PDE6B-202ENST00000429163 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
PDE6B-202ENST00000429163 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
PDE6B-202ENST00000429163 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 80.7 ms