RNA–Protein interactions for RNA: ENST00000428575.6

XRCC6-206, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2 BASIC

Gene XRCC6, Length 2,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-206ENST00000428575 KRTAP9-2Q9BYQ4 174 aa3.86□□□□□ -1.79
XRCC6-206ENST00000428575 MT1LQ93083 61 aa3.83□□□□□ -1.8
XRCC6-206ENST00000428575 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
XRCC6-206ENST00000428575 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
XRCC6-206ENST00000428575 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
XRCC6-206ENST00000428575 CRCT1Q9UGL9 99 aa3.73□□□□□ -1.81
XRCC6-206ENST00000428575 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
XRCC6-206ENST00000428575 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
XRCC6-206ENST00000428575 SPRR2FQ96RM1 72 aa3.68□□□□□ -1.82
XRCC6-206ENST00000428575 MT1GP13640 62 aa3.66□□□□□ -1.82
XRCC6-206ENST00000428575 SYNE2Q8WXH0 6885 aaKnown RBP3.64□□□□□ -1.83
XRCC6-206ENST00000428575 MT1MQ8N339 61 aa3.64□□□□□ -1.83
XRCC6-206ENST00000428575 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
XRCC6-206ENST00000428575 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.84
XRCC6-206ENST00000428575 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
XRCC6-206ENST00000428575 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
XRCC6-206ENST00000428575 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
XRCC6-206ENST00000428575 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
XRCC6-206ENST00000428575 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
XRCC6-206ENST00000428575 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
XRCC6-206ENST00000428575 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.45□□□□□ -1.86
XRCC6-206ENST00000428575 SPRR2EP22531 72 aa3.43□□□□□ -1.86
XRCC6-206ENST00000428575 SPRR2BP35325 72 aa3.43□□□□□ -1.86
XRCC6-206ENST00000428575 SPRR2AP35326 72 aa3.43□□□□□ -1.86
XRCC6-206ENST00000428575 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
XRCC6-206ENST00000428575 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
XRCC6-206ENST00000428575 MT1AP04731 61 aa3.36□□□□□ -1.87
XRCC6-206ENST00000428575 SPRR2DP22532 72 aa3.3□□□□□ -1.88
XRCC6-206ENST00000428575 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
XRCC6-206ENST00000428575 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
XRCC6-206ENST00000428575 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
XRCC6-206ENST00000428575 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
XRCC6-206ENST00000428575 NEBP20929 6669 aa3.23□□□□□ -1.89
XRCC6-206ENST00000428575 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
XRCC6-206ENST00000428575 LCE3BQ5TA77 95 aa3.21□□□□□ -1.9
XRCC6-206ENST00000428575 PRM1P04553 51 aa3.2□□□□□ -1.9
XRCC6-206ENST00000428575 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.91
XRCC6-206ENST00000428575 KRTAP4-9Q9BYQ8 210 aa3.13□□□□□ -1.91
XRCC6-206ENST00000428575 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
XRCC6-206ENST00000428575 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
XRCC6-206ENST00000428575 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
XRCC6-206ENST00000428575 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
XRCC6-206ENST00000428575 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
XRCC6-206ENST00000428575 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
XRCC6-206ENST00000428575 MT3P25713 68 aa2.93□□□□□ -1.94
XRCC6-206ENST00000428575 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
XRCC6-206ENST00000428575 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
XRCC6-206ENST00000428575 MT4P47944 62 aa2.88□□□□□ -1.95
XRCC6-206ENST00000428575 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
XRCC6-206ENST00000428575 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
XRCC6-206ENST00000428575 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
XRCC6-206ENST00000428575 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
XRCC6-206ENST00000428575 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
XRCC6-206ENST00000428575 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
XRCC6-206ENST00000428575 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
XRCC6-206ENST00000428575 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
XRCC6-206ENST00000428575 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
XRCC6-206ENST00000428575 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
XRCC6-206ENST00000428575 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
XRCC6-206ENST00000428575 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
XRCC6-206ENST00000428575 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
XRCC6-206ENST00000428575 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
XRCC6-206ENST00000428575 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
XRCC6-206ENST00000428575 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
XRCC6-206ENST00000428575 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
XRCC6-206ENST00000428575 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
XRCC6-206ENST00000428575 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
XRCC6-206ENST00000428575 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
XRCC6-206ENST00000428575 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
XRCC6-206ENST00000428575 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
XRCC6-206ENST00000428575 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
XRCC6-206ENST00000428575 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
XRCC6-206ENST00000428575 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
XRCC6-206ENST00000428575 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
XRCC6-206ENST00000428575 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
XRCC6-206ENST00000428575 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
XRCC6-206ENST00000428575 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 16.7 ms