RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 HYDINQ4G0P3 5121 aa1.48□□□□□ -2.17
NUDCD1-202ENST00000427660 TNP1P09430 55 aa1.48□□□□□ -2.17
NUDCD1-202ENST00000427660 RYR1P21817 5038 aa1.47□□□□□ -2.17
NUDCD1-202ENST00000427660 FAT3Q8TDW7 4589 aa1.47□□□□□ -2.17
NUDCD1-202ENST00000427660 HERC2O95714 4834 aa1.47□□□□□ -2.17
NUDCD1-202ENST00000427660 A0A0D9SG42 100 aa1.46□□□□□ -2.18
NUDCD1-202ENST00000427660 PLAC4Q8WY50 150 aa1.46□□□□□ -2.18
NUDCD1-202ENST00000427660 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
NUDCD1-202ENST00000427660 MYCBP2O75592 4640 aa1.43□□□□□ -2.18
NUDCD1-202ENST00000427660 SPRR2GQ9BYE4 73 aa1.43□□□□□ -2.18
NUDCD1-202ENST00000427660 MUC17Q685J3 4493 aa1.43□□□□□ -2.18
NUDCD1-202ENST00000427660 LRP1Q07954 4544 aaKnown RBP1.42□□□□□ -2.18
NUDCD1-202ENST00000427660 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
NUDCD1-202ENST00000427660 DMBT1Q9UGM3 2413 aaPredicted RBP1.41□□□□□ -2.18
NUDCD1-202ENST00000427660 M0R2T5 61 aa1.39□□□□□ -2.19
NUDCD1-202ENST00000427660 KRTAP19-2Q3LHN2 52 aa1.39□□□□□ -2.19
NUDCD1-202ENST00000427660 KIAA1109Q2LD37 5005 aa1.38□□□□□ -2.19
NUDCD1-202ENST00000427660 KMT2CQ8NEZ4 4911 aaKnown RBP1.38□□□□□ -2.19
NUDCD1-202ENST00000427660 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
NUDCD1-202ENST00000427660 EPPK1P58107 5090 aaKnown RBP1.38□□□□□ -2.19
NUDCD1-202ENST00000427660 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
NUDCD1-202ENST00000427660 KRTAP4-1Q9BYQ7 146 aa1.35□□□□□ -2.19
NUDCD1-202ENST00000427660 HERC1Q15751 4861 aa1.35□□□□□ -2.19
NUDCD1-202ENST00000427660 MT1HP80294 61 aa1.34□□□□□ -2.19
NUDCD1-202ENST00000427660 KRTAP8-1Q8IUC2 63 aa1.31□□□□□ -2.2
NUDCD1-202ENST00000427660 ABCA13Q86UQ4 5058 aa1.31□□□□□ -2.2
NUDCD1-202ENST00000427660 FLGP20930 4061 aaPredicted RBP1.31□□□□□ -2.2
NUDCD1-202ENST00000427660 MT2AP02795 61 aa1.3□□□□□ -2.2
NUDCD1-202ENST00000427660 UBR4Q5T4S7 5183 aa1.3□□□□□ -2.2
NUDCD1-202ENST00000427660 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
NUDCD1-202ENST00000427660 LRP2P98164 4655 aa1.28□□□□□ -2.2
NUDCD1-202ENST00000427660 MT1FP04733 61 aa1.27□□□□□ -2.21
NUDCD1-202ENST00000427660 SYNE2Q8WXH0 6885 aaKnown RBP1.26□□□□□ -2.21
NUDCD1-202ENST00000427660 MT1BP07438 61 aa1.24□□□□□ -2.21
NUDCD1-202ENST00000427660 HMCN2Q8NDA2 5059 aa1.24□□□□□ -2.21
NUDCD1-202ENST00000427660 MT1XP80297 61 aa1.23□□□□□ -2.21
NUDCD1-202ENST00000427660 FAT4Q6V0I7 4981 aa1.23□□□□□ -2.21
NUDCD1-202ENST00000427660 LPAP08519 4548 aa1.21□□□□□ -2.22
NUDCD1-202ENST00000427660 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
NUDCD1-202ENST00000427660 RNF213Q63HN8 5207 aa1.19□□□□□ -2.22
NUDCD1-202ENST00000427660 KRTAP19-6Q3LI70 58 aa1.18□□□□□ -2.22
NUDCD1-202ENST00000427660 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
NUDCD1-202ENST00000427660 SSPOA2VEC9 5147 aa1.18□□□□□ -2.22
NUDCD1-202ENST00000427660 MUC2Q02817 5179 aa1.17□□□□□ -2.22
NUDCD1-202ENST00000427660 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
NUDCD1-202ENST00000427660 MT1EP04732 61 aa1.13□□□□□ -2.23
NUDCD1-202ENST00000427660 MT1GP13640 62 aa1.12□□□□□ -2.23
NUDCD1-202ENST00000427660 KRTAP19-5Q3LI72 72 aa1.12□□□□□ -2.23
NUDCD1-202ENST00000427660 MT1LQ93083 61 aa1.12□□□□□ -2.23
NUDCD1-202ENST00000427660 KMT2DO14686 5537 aa1.11□□□□□ -2.23
NUDCD1-202ENST00000427660 FCGBPQ9Y6R7 5405 aaPredicted RBP1.09□□□□□ -2.23
NUDCD1-202ENST00000427660 KRTAP20-1Q3LI63 56 aa1.09□□□□□ -2.23
NUDCD1-202ENST00000427660 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.24
NUDCD1-202ENST00000427660 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
NUDCD1-202ENST00000427660 KRTAP2-3P0C7H8 128 aa1.07□□□□□ -2.24
NUDCD1-202ENST00000427660 KRTAP2-4Q9BYR9 128 aa1.07□□□□□ -2.24
NUDCD1-202ENST00000427660 KRTAP2-1Q9BYU5 128 aa1.07□□□□□ -2.24
NUDCD1-202ENST00000427660 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
NUDCD1-202ENST00000427660 MT1MQ8N339 61 aa1.04□□□□□ -2.24
NUDCD1-202ENST00000427660 FSIP2Q5CZC0 6907 aa1.03□□□□□ -2.25
NUDCD1-202ENST00000427660 MT1AP04731 61 aa1.01□□□□□ -2.25
NUDCD1-202ENST00000427660 USH2AO75445 5202 aa1.01□□□□□ -2.25
NUDCD1-202ENST00000427660 SPRR2FQ96RM1 72 aa1□□□□□ -2.25
NUDCD1-202ENST00000427660 SPRR2EP22531 72 aa0.93□□□□□ -2.26
NUDCD1-202ENST00000427660 SPRR2BP35325 72 aa0.93□□□□□ -2.26
NUDCD1-202ENST00000427660 SPRR2AP35326 72 aa0.93□□□□□ -2.26
NUDCD1-202ENST00000427660 SPRR2DP22532 72 aa0.92□□□□□ -2.26
NUDCD1-202ENST00000427660 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
NUDCD1-202ENST00000427660 KRTAP20-2Q3LI61 65 aa0.78□□□□□ -2.28
NUDCD1-202ENST00000427660 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
NUDCD1-202ENST00000427660 MUC12Q9UKN1 5478 aa0.78□□□□□ -2.28
NUDCD1-202ENST00000427660 PRM1P04553 51 aa0.76□□□□□ -2.29
NUDCD1-202ENST00000427660 MT4P47944 62 aa0.7□□□□□ -2.3
NUDCD1-202ENST00000427660 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
NUDCD1-202ENST00000427660 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
NUDCD1-202ENST00000427660 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
NUDCD1-202ENST00000427660 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms