RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 MACF1Q9UPN3 7388 aaKnown RBP7.43□□□□□ -1.22
CNEP1R1-202ENST00000427478 KRTAP19-3Q7Z4W3 81 aa7.41□□□□□ -1.22
CNEP1R1-202ENST00000427478 MUC12Q9UKN1 5478 aa7.4□□□□□ -1.23
CNEP1R1-202ENST00000427478 MT1GP13640 62 aa7.33□□□□□ -1.24
CNEP1R1-202ENST00000427478 MT1MQ8N339 61 aa7.31□□□□□ -1.24
CNEP1R1-202ENST00000427478 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
CNEP1R1-202ENST00000427478 LCE5AQ5TCM9 118 aa7.22□□□□□ -1.25
CNEP1R1-202ENST00000427478 A0A0A0MQY5 61 aa7.19□□□□□ -1.26
CNEP1R1-202ENST00000427478 SYNE2Q8WXH0 6885 aaKnown RBP7.17□□□□□ -1.26
CNEP1R1-202ENST00000427478 KRTAP5-9P26371 169 aa7.15□□□□□ -1.27
CNEP1R1-202ENST00000427478 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
CNEP1R1-202ENST00000427478 LCE1AQ5T7P2 110 aa7.03□□□□□ -1.28
CNEP1R1-202ENST00000427478 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
CNEP1R1-202ENST00000427478 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
CNEP1R1-202ENST00000427478 KRTAP2-3P0C7H8 128 aa6.95□□□□□ -1.3
CNEP1R1-202ENST00000427478 SPRR2EP22531 72 aa6.95□□□□□ -1.3
CNEP1R1-202ENST00000427478 SPRR2BP35325 72 aa6.95□□□□□ -1.3
CNEP1R1-202ENST00000427478 SPRR2AP35326 72 aa6.95□□□□□ -1.3
CNEP1R1-202ENST00000427478 KRTAP2-4Q9BYR9 128 aa6.95□□□□□ -1.3
CNEP1R1-202ENST00000427478 KRTAP2-1Q9BYU5 128 aa6.95□□□□□ -1.3
CNEP1R1-202ENST00000427478 MDN1Q9NU22 5596 aa6.93□□□□□ -1.3
CNEP1R1-202ENST00000427478 DSTQ03001 7570 aaKnown RBP6.88□□□□□ -1.31
CNEP1R1-202ENST00000427478 KRTAP6-3Q3LI67 103 aa6.85□□□□□ -1.31
CNEP1R1-202ENST00000427478 SPRR2DP22532 72 aa6.67□□□□□ -1.34
CNEP1R1-202ENST00000427478 INE1O15225 51 aa6.64□□□□□ -1.35
CNEP1R1-202ENST00000427478 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
CNEP1R1-202ENST00000427478 KRTAP5-5Q701N2 237 aaPredicted RBP6.54□□□□□ -1.36
CNEP1R1-202ENST00000427478 KRTAP6-1Q3LI64 71 aa6.5□□□□□ -1.37
CNEP1R1-202ENST00000427478 MT1AP04731 61 aa6.5□□□□□ -1.37
CNEP1R1-202ENST00000427478 KRTAP9-7A8MTY7 169 aa6.45□□□□□ -1.38
CNEP1R1-202ENST00000427478 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
CNEP1R1-202ENST00000427478 NEBP20929 6669 aa6.27□□□□□ -1.41
CNEP1R1-202ENST00000427478 SYNE1Q8NF91 8797 aaKnown RBP6.22□□□□□ -1.41
CNEP1R1-202ENST00000427478 KRTAP4-9Q9BYQ8 210 aa6.18□□□□□ -1.42
CNEP1R1-202ENST00000427478 KRTAP9-4Q9BYQ2 154 aa6.15□□□□□ -1.42
CNEP1R1-202ENST00000427478 KRTAP5-4Q6L8H1 288 aa6.05□□□□□ -1.44
CNEP1R1-202ENST00000427478 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
CNEP1R1-202ENST00000427478 KRTAP6-2Q3LI66 62 aa5.93□□□□□ -1.46
CNEP1R1-202ENST00000427478 LCE3DQ9BYE3 92 aa5.9□□□□□ -1.47
CNEP1R1-202ENST00000427478 MT3P25713 68 aa5.86□□□□□ -1.47
CNEP1R1-202ENST00000427478 MT4P47944 62 aa5.85□□□□□ -1.47
CNEP1R1-202ENST00000427478 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
CNEP1R1-202ENST00000427478 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
CNEP1R1-202ENST00000427478 LCE3EQ5T5B0 92 aa5.77□□□□□ -1.49
CNEP1R1-202ENST00000427478 KRTAP20-1Q3LI63 56 aa5.74□□□□□ -1.49
CNEP1R1-202ENST00000427478 KRTAP20-2Q3LI61 65 aa5.69□□□□□ -1.5
CNEP1R1-202ENST00000427478 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
CNEP1R1-202ENST00000427478 KRTAP5-2Q701N4 177 aa5.55□□□□□ -1.52
CNEP1R1-202ENST00000427478 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
CNEP1R1-202ENST00000427478 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
CNEP1R1-202ENST00000427478 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
CNEP1R1-202ENST00000427478 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
CNEP1R1-202ENST00000427478 PRM1P04553 51 aa5.25□□□□□ -1.57
CNEP1R1-202ENST00000427478 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
CNEP1R1-202ENST00000427478 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
CNEP1R1-202ENST00000427478 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
CNEP1R1-202ENST00000427478 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.64
CNEP1R1-202ENST00000427478 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
CNEP1R1-202ENST00000427478 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
CNEP1R1-202ENST00000427478 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
CNEP1R1-202ENST00000427478 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
CNEP1R1-202ENST00000427478 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
CNEP1R1-202ENST00000427478 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
CNEP1R1-202ENST00000427478 LCE1CQ5T751 118 aa4.65□□□□□ -1.67
CNEP1R1-202ENST00000427478 KRTAP5-7Q6L8G8 165 aa4.51□□□□□ -1.69
CNEP1R1-202ENST00000427478 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
CNEP1R1-202ENST00000427478 KRTAP21-2Q3LI59 83 aa4.22□□□□□ -1.73
CNEP1R1-202ENST00000427478 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
CNEP1R1-202ENST00000427478 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
CNEP1R1-202ENST00000427478 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
CNEP1R1-202ENST00000427478 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
CNEP1R1-202ENST00000427478 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
CNEP1R1-202ENST00000427478 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
CNEP1R1-202ENST00000427478 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
CNEP1R1-202ENST00000427478 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
CNEP1R1-202ENST00000427478 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
CNEP1R1-202ENST00000427478 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 191.1 ms