RNA–Protein interactions for RNA: ENST00000427419.5

SLC40A1-204, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-204ENST00000427419 K7ERS5 55 aa3.52□□□□□ -1.85
SLC40A1-204ENST00000427419 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
SLC40A1-204ENST00000427419 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
SLC40A1-204ENST00000427419 V9GYY9 64 aa3.51□□□□□ -1.85
SLC40A1-204ENST00000427419 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
SLC40A1-204ENST00000427419 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
SLC40A1-204ENST00000427419 KRTAP25-1Q3LHN0 102 aa3.48□□□□□ -1.85
SLC40A1-204ENST00000427419 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
SLC40A1-204ENST00000427419 Q1T7F1 81 aa3.42□□□□□ -1.86
SLC40A1-204ENST00000427419 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
SLC40A1-204ENST00000427419 MT4P47944 62 aa3.41□□□□□ -1.86
SLC40A1-204ENST00000427419 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
SLC40A1-204ENST00000427419 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
SLC40A1-204ENST00000427419 H3BS24 57 aa3.4□□□□□ -1.87
SLC40A1-204ENST00000427419 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
SLC40A1-204ENST00000427419 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
SLC40A1-204ENST00000427419 PSPHP1O15172 72 aa3.39□□□□□ -1.87
SLC40A1-204ENST00000427419 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
SLC40A1-204ENST00000427419 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
SLC40A1-204ENST00000427419 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
SLC40A1-204ENST00000427419 A6NED7 52 aa3.32□□□□□ -1.88
SLC40A1-204ENST00000427419 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
SLC40A1-204ENST00000427419 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
SLC40A1-204ENST00000427419 CDC42SE1Q9NRR8 79 aa3.29□□□□□ -1.88
SLC40A1-204ENST00000427419 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
SLC40A1-204ENST00000427419 SVIPQ8NHG7 77 aa3.27□□□□□ -1.89
SLC40A1-204ENST00000427419 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
SLC40A1-204ENST00000427419 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
SLC40A1-204ENST00000427419 RPS28P62857 69 aaKnown RBP3.25□□□□□ -1.89
SLC40A1-204ENST00000427419 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
SLC40A1-204ENST00000427419 ROMO1P60602 79 aa3.21□□□□□ -1.9
SLC40A1-204ENST00000427419 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
SLC40A1-204ENST00000427419 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
SLC40A1-204ENST00000427419 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
SLC40A1-204ENST00000427419 LOC100996750A0A140TA64 210 aa3.16□□□□□ -1.9
SLC40A1-204ENST00000427419 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
SLC40A1-204ENST00000427419 PCP4P48539 62 aa3.11□□□□□ -1.91
SLC40A1-204ENST00000427419 MT1AP04731 61 aa3.07□□□□□ -1.92
SLC40A1-204ENST00000427419 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
SLC40A1-204ENST00000427419 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
SLC40A1-204ENST00000427419 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
SLC40A1-204ENST00000427419 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
SLC40A1-204ENST00000427419 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
SLC40A1-204ENST00000427419 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
SLC40A1-204ENST00000427419 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
SLC40A1-204ENST00000427419 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
SLC40A1-204ENST00000427419 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
SLC40A1-204ENST00000427419 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
SLC40A1-204ENST00000427419 MT3P25713 68 aa2.83□□□□□ -1.96
SLC40A1-204ENST00000427419 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
SLC40A1-204ENST00000427419 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
SLC40A1-204ENST00000427419 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
SLC40A1-204ENST00000427419 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
SLC40A1-204ENST00000427419 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
SLC40A1-204ENST00000427419 PMAIP1Q13794 54 aa2.66□□□□□ -1.98
SLC40A1-204ENST00000427419 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
SLC40A1-204ENST00000427419 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
SLC40A1-204ENST00000427419 PRAC1Q96KF2 57 aa2.49□□□□□ -2.01
SLC40A1-204ENST00000427419 PRO0628Q9UI54 55 aa2.44□□□□□ -2.02
SLC40A1-204ENST00000427419 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
SLC40A1-204ENST00000427419 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
SLC40A1-204ENST00000427419 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
SLC40A1-204ENST00000427419 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
SLC40A1-204ENST00000427419 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
SLC40A1-204ENST00000427419 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
SLC40A1-204ENST00000427419 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
SLC40A1-204ENST00000427419 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
SLC40A1-204ENST00000427419 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
SLC40A1-204ENST00000427419 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
SLC40A1-204ENST00000427419 NDUFAF8A1L188 74 aa2□□□□□ -2.09
SLC40A1-204ENST00000427419 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SLC40A1-204ENST00000427419 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
SLC40A1-204ENST00000427419 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
SLC40A1-204ENST00000427419 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
SLC40A1-204ENST00000427419 PRM1P04553 51 aa1.61□□□□□ -2.15
SLC40A1-204ENST00000427419 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
SLC40A1-204ENST00000427419 INE1O15225 51 aa1.41□□□□□ -2.18
SLC40A1-204ENST00000427419 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 87.1 ms