RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 MT1HL1P0DM35 61 aa2.33□□□□□ -2.04
LINC00458-202ENST00000427299 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
LINC00458-202ENST00000427299 MUC17Q685J3 4493 aa2.29□□□□□ -2.04
LINC00458-202ENST00000427299 KIAA1109Q2LD37 5005 aa2.28□□□□□ -2.04
LINC00458-202ENST00000427299 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.04
LINC00458-202ENST00000427299 LRP2P98164 4655 aa2.27□□□□□ -2.05
LINC00458-202ENST00000427299 HERC1Q15751 4861 aa2.25□□□□□ -2.05
LINC00458-202ENST00000427299 LPAP08519 4548 aa2.25□□□□□ -2.05
LINC00458-202ENST00000427299 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
LINC00458-202ENST00000427299 FLGP20930 4061 aaPredicted RBP2.21□□□□□ -2.06
LINC00458-202ENST00000427299 CRCT1Q9UGL9 99 aa2.19□□□□□ -2.06
LINC00458-202ENST00000427299 PLAC4Q8WY50 150 aa2.18□□□□□ -2.06
LINC00458-202ENST00000427299 TNP1P09430 55 aa2.16□□□□□ -2.06
LINC00458-202ENST00000427299 KRTAP4-1Q9BYQ7 146 aa2.13□□□□□ -2.07
LINC00458-202ENST00000427299 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
LINC00458-202ENST00000427299 KRTAP19-2Q3LHN2 52 aa2.1□□□□□ -2.07
LINC00458-202ENST00000427299 MUC2Q02817 5179 aa2.07□□□□□ -2.08
LINC00458-202ENST00000427299 RNF213Q63HN8 5207 aa2.07□□□□□ -2.08
LINC00458-202ENST00000427299 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
LINC00458-202ENST00000427299 HMCN2Q8NDA2 5059 aa2.05□□□□□ -2.08
LINC00458-202ENST00000427299 SPRR2GQ9BYE4 73 aa2.05□□□□□ -2.08
LINC00458-202ENST00000427299 M0R2T5 61 aa2.01□□□□□ -2.09
LINC00458-202ENST00000427299 KRTAP12-3P60328 96 aa2□□□□□ -2.09
LINC00458-202ENST00000427299 FSIP2Q5CZC0 6907 aa1.99□□□□□ -2.09
LINC00458-202ENST00000427299 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
LINC00458-202ENST00000427299 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
LINC00458-202ENST00000427299 MT1HP80294 61 aa1.95□□□□□ -2.1
LINC00458-202ENST00000427299 KRTAP19-8Q3LI54 63 aa1.95□□□□□ -2.1
LINC00458-202ENST00000427299 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
LINC00458-202ENST00000427299 MT2AP02795 61 aa1.92□□□□□ -2.1
LINC00458-202ENST00000427299 INE1O15225 51 aa1.91□□□□□ -2.1
LINC00458-202ENST00000427299 MT1FP04733 61 aa1.91□□□□□ -2.1
LINC00458-202ENST00000427299 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
LINC00458-202ENST00000427299 MT1XP80297 61 aa1.87□□□□□ -2.11
LINC00458-202ENST00000427299 MT1BP07438 61 aa1.86□□□□□ -2.11
LINC00458-202ENST00000427299 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
LINC00458-202ENST00000427299 SYNE2Q8WXH0 6885 aaKnown RBP1.73□□□□□ -2.13
LINC00458-202ENST00000427299 NEBP20929 6669 aa1.68□□□□□ -2.14
LINC00458-202ENST00000427299 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
LINC00458-202ENST00000427299 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
LINC00458-202ENST00000427299 KRTAP2-3P0C7H8 128 aa1.65□□□□□ -2.15
LINC00458-202ENST00000427299 KRTAP19-7Q3SYF9 63 aa1.65□□□□□ -2.15
LINC00458-202ENST00000427299 KRTAP2-4Q9BYR9 128 aa1.65□□□□□ -2.15
LINC00458-202ENST00000427299 KRTAP2-1Q9BYU5 128 aa1.65□□□□□ -2.15
LINC00458-202ENST00000427299 MT1EP04732 61 aa1.64□□□□□ -2.15
LINC00458-202ENST00000427299 USH2AO75445 5202 aa1.64□□□□□ -2.15
LINC00458-202ENST00000427299 MACF1Q9UPN3 7388 aaKnown RBP1.64□□□□□ -2.15
LINC00458-202ENST00000427299 KMT2DO14686 5537 aa1.63□□□□□ -2.15
LINC00458-202ENST00000427299 MT1LQ93083 61 aa1.63□□□□□ -2.15
LINC00458-202ENST00000427299 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
LINC00458-202ENST00000427299 KRTAP19-6Q3LI70 58 aa1.6□□□□□ -2.15
LINC00458-202ENST00000427299 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.16
LINC00458-202ENST00000427299 MT1GP13640 62 aa1.54□□□□□ -2.16
LINC00458-202ENST00000427299 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
LINC00458-202ENST00000427299 MT1MQ8N339 61 aa1.53□□□□□ -2.16
LINC00458-202ENST00000427299 SPRR2FQ96RM1 72 aa1.45□□□□□ -2.18
LINC00458-202ENST00000427299 MT1AP04731 61 aa1.44□□□□□ -2.18
LINC00458-202ENST00000427299 MDN1Q9NU22 5596 aa1.43□□□□□ -2.18
LINC00458-202ENST00000427299 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
LINC00458-202ENST00000427299 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
LINC00458-202ENST00000427299 DSTQ03001 7570 aaKnown RBP1.34□□□□□ -2.19
LINC00458-202ENST00000427299 SPRR2EP22531 72 aa1.32□□□□□ -2.2
LINC00458-202ENST00000427299 SPRR2BP35325 72 aa1.32□□□□□ -2.2
LINC00458-202ENST00000427299 SPRR2AP35326 72 aa1.32□□□□□ -2.2
LINC00458-202ENST00000427299 PRM1P04553 51 aa1.3□□□□□ -2.2
LINC00458-202ENST00000427299 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
LINC00458-202ENST00000427299 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
LINC00458-202ENST00000427299 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
LINC00458-202ENST00000427299 SPRR2DP22532 72 aa1.27□□□□□ -2.21
LINC00458-202ENST00000427299 KRTAP6-2Q3LI66 62 aa1.24□□□□□ -2.21
LINC00458-202ENST00000427299 MUC5BQ9HC84 5762 aaPredicted RBP1.17□□□□□ -2.22
LINC00458-202ENST00000427299 MT4P47944 62 aa1.16□□□□□ -2.22
LINC00458-202ENST00000427299 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
LINC00458-202ENST00000427299 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
LINC00458-202ENST00000427299 KRTAP20-2Q3LI61 65 aa1.09□□□□□ -2.23
LINC00458-202ENST00000427299 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
LINC00458-202ENST00000427299 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms